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Asym. Unit
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Asym.Unit (650 KB)
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Models
(20 )
Title
:
A PH DOMAIN WITHIN OCRL BRIDGES CLATHRIN MEDIATED MEMBRANE TRAFFICKING TO PHOSPHOINOSITIDE METABOLIS
Authors
:
Y. Mao, D. M. Balkin, R. Zoncu, K. Erdmann, L. Tomasini, F. Hu, M. M. Jin, M. E. Hodsdon, P. De Camilli
Date
:
03 May 09 (Deposition) - 21 Jul 09 (Release) - 21 Jul 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Ocrl, Inpp5B, Ph, Clathrin, Endocytosis, Alternative Splicing, Cataract, Disease Mutation, Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Mao, D. M. Balkin, R. Zoncu, K. S. Erdmann, L. Tomasini, F. Hu, M. M. Jin, M. E. Hodsdon, P. De Camilli
A Ph Domain Within Ocrl Bridges Clathrin-Mediated Membrane Trafficking To Phosphoinositide Metabolism
Embo J. V. 28 1831 2009
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
(6, 6)
Info
All Exons
Exon 1.2a (A:6-18)
Exon 1.3a (A:19-45)
Exon 1.4 (A:45-72)
Exon 1.5a (A:72-85)
Exon 1.7 (A:85-122)
Exon 1.8 (A:122-124)
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1: Boundary -/1.2a
2: Boundary 1.2a/1.3a
3: Boundary 1.3a/1.4
4: Boundary 1.4/1.5a
5: Boundary 1.5a/1.7
6: Boundary 1.7/1.8
7: Boundary 1.8/1.9
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2a
ENST00000371113
2a
ENSE00001518494
X:128674252-128674455
204
OCRL_HUMAN
1-13
13
1
A:6-18
13
1.3a
ENST00000371113
3a
ENSE00001454376
X:128674721-128674800
80
OCRL_HUMAN
14-40
27
1
A:19-45
27
1.4
ENST00000371113
4
ENSE00001613852
X:128678935-128679014
80
OCRL_HUMAN
40-67
28
1
A:45-72
28
1.5a
ENST00000371113
5a
ENSE00001633886
X:128682540-128682578
39
OCRL_HUMAN
67-80
14
1
A:72-85
14
1.7
ENST00000371113
7
ENSE00000828196
X:128691302-128691412
111
OCRL_HUMAN
80-117
38
1
A:85-122
38
1.8
ENST00000371113
8
ENSE00000828195
X:128691838-128691927
90
OCRL_HUMAN
117-147
31
1
A:122-124
3
1.9
ENST00000371113
9
ENSE00000828194
X:128692610-128692730
121
OCRL_HUMAN
147-187
41
0
-
-
1.10b
ENST00000371113
10b
ENSE00000828193
X:128692817-128692978
162
OCRL_HUMAN
187-241
55
0
-
-
1.11
ENST00000371113
11
ENSE00000828192
X:128694527-128694628
102
OCRL_HUMAN
241-275
35
0
-
-
1.12
ENST00000371113
12
ENSE00000828191
X:128695156-128695270
115
OCRL_HUMAN
275-313
39
0
-
-
1.13
ENST00000371113
13
ENSE00000828190
X:128696361-128696477
117
OCRL_HUMAN
314-352
39
0
-
-
1.14
ENST00000371113
14
ENSE00000828189
X:128696576-128696763
188
OCRL_HUMAN
353-415
63
0
-
-
1.15
ENST00000371113
15
ENSE00000828188
X:128699749-128699860
112
OCRL_HUMAN
415-452
38
0
-
-
1.16a
ENST00000371113
16a
ENSE00000828187
X:128701231-128701340
110
OCRL_HUMAN
453-489
37
0
-
-
1.17
ENST00000371113
17
ENSE00001795169
X:128703241-128703376
136
OCRL_HUMAN
489-534
46
0
-
-
1.18
ENST00000371113
18
ENSE00000828185
X:128709117-128709227
111
OCRL_HUMAN
535-571
37
0
-
-
1.19
ENST00000371113
19
ENSE00000828184
X:128709874-128710039
166
OCRL_HUMAN
572-627
56
0
-
-
1.20b
ENST00000371113
20b
ENSE00000828183
X:128710294-128710529
236
OCRL_HUMAN
627-705
79
0
-
-
1.21
ENST00000371113
21
ENSE00001454375
X:128718321-128718344
24
OCRL_HUMAN
706-713
8
0
-
-
1.23
ENST00000371113
23
ENSE00000828182
X:128720979-128721095
117
OCRL_HUMAN
714-752
39
0
-
-
1.24
ENST00000371113
24
ENSE00000828181
X:128722156-128722240
85
OCRL_HUMAN
753-781
29
0
-
-
1.25
ENST00000371113
25
ENSE00000828180
X:128722863-128722990
128
OCRL_HUMAN
781-823
43
0
-
-
1.26b
ENST00000371113
26b
ENSE00000828179
X:128723822-128723933
112
OCRL_HUMAN
824-861
38
0
-
-
1.27c
ENST00000371113
27c
ENSE00001170507
X:128724123-128726538
2416
OCRL_HUMAN
861-901
41
0
-
-
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Asymmetric Unit 1
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