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2JW2
Asym. Unit
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Asym.Unit (348 KB)
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Models
(16 )
Title
:
VALIDATION OF INTER-HELICAL ORIENTATION OF THE STERIL-ALPHA-MOTIF OF HUMAN DELETED IN LIVER CANCER 2 BY RESIDUAL DIPOLAR COUPLINGS
Authors
:
H. Li, K. Sze, K. Fung
Date
:
03 Oct 07 (Deposition) - 21 Oct 08 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (16 x)
Keywords
:
Dlc2-Sam, Rdc Refinement, Alternative Splicing, Anti- Oncogene, Cell Cycle, Cytoplasm, Gtpase Activation, Polymorphism, Lipid Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Li, K. Sze, K. Fung, H. Sun
Validation Of Inter-Helical Orientation Of The Steril-Alpha-Motif Of Human Deleted In Liver Cancer 2 By Residual Dipolar Couplings
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(4, 4)
Info
All Exons
Exon 1.1a (A:1-18 (gaps))
Exon 1.4b (A:18-42)
Exon 1.5 (A:42-69)
Exon 1.7 (A:69-81)
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1: Boundary -/1.1a
2: Boundary 1.1a/1.4b
3: Boundary 1.4b/1.5
4: Boundary 1.5/1.7
5: Boundary 1.7/1.9
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000336934
1a
ENSE00002177288
chr13:
33859892-33859607
286
STA13_HUMAN
1-57
57
1
A:1-18 (gaps)
32
1.4b
ENST00000336934
4b
ENSE00001798260
chr13:
33741759-33741688
72
STA13_HUMAN
57-81
25
1
A:18-42
25
1.5
ENST00000336934
5
ENSE00001746318
chr13:
33739555-33739474
82
STA13_HUMAN
81-108
28
1
A:42-69
28
1.7
ENST00000336934
7
ENSE00001619826
chr13:
33716510-33716447
64
STA13_HUMAN
108-129
22
1
A:69-81
13
1.9
ENST00000336934
9
ENSE00000907354
chr13:
33704426-33703066
1361
STA13_HUMAN
130-583
454
0
-
-
1.10
ENST00000336934
10
ENSE00000907353
chr13:
33701683-33701510
174
STA13_HUMAN
583-641
59
0
-
-
1.11
ENST00000336934
11
ENSE00000907352
chr13:
33700377-33700218
160
STA13_HUMAN
641-694
54
0
-
-
1.12
ENST00000336934
12
ENSE00000907350
chr13:
33692400-33692202
199
STA13_HUMAN
695-761
67
0
-
-
1.14b
ENST00000336934
14b
ENSE00000907348
chr13:
33687068-33686858
211
STA13_HUMAN
761-831
71
0
-
-
1.15b
ENST00000336934
15b
ENSE00000907347
chr13:
33686029-33685915
115
STA13_HUMAN
831-869
39
0
-
-
1.16
ENST00000336934
16
ENSE00000907345
chr13:
33685044-33684823
222
STA13_HUMAN
870-943
74
0
-
-
1.17
ENST00000336934
17
ENSE00000907343
chr13:
33684227-33684010
218
STA13_HUMAN
944-1016
73
0
-
-
1.18
ENST00000336934
18
ENSE00000907341
chr13:
33681071-33680895
177
STA13_HUMAN
1016-1075
60
0
-
-
1.19a
ENST00000336934
19a
ENSE00001872311
chr13:
33679847-33677307
2541
STA13_HUMAN
1075-1113
39
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2jw2a_ (A:)
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)
Class
:
All alpha proteins
(14657)
Fold
:
SAM domain-like
(639)
Superfamily
:
SAM/Pointed domain
(61)
Family
:
Variant SAM domain
(4)
Protein domain
:
Deleted in Liver Cancer 2, DLC2
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d2jw2a_
A:
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (348 KB)
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