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2JLD
Biol. Unit 3
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Asym.Unit (126 KB)
Biol.Unit 1 (117 KB)
Biol.Unit 2 (60 KB)
Biol.Unit 3 (61 KB)
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(1)
Title
:
EXTREMELY TIGHT BINDING OF RUTHENIUM COMPLEX TO GLYCOGEN SYNTHASE KINASE 3
Authors
:
G. E. Atilla-Gokcumen, N. Pagano, C. Streu, J. Maksimoska, P. Filippakopoulos, S. Knapp, E. Meggers
Date
:
08 Sep 08 (Deposition) - 09 Dec 08 (Release) - 27 Apr 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.35
Chains
:
Asym. Unit : A,B,E
Biol. Unit 1: A,B,E (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,E (1x)
Keywords
:
Wnt Signaling Pathway, Serine/Threonine-Protein Kinase, Ruthenium Glycogen Synthase Kinase Picomolar, Nucleotide-Binding, Alternative Splicing, Kinase, Transferase, Atp-Binding, Phosphoprotein
(Keyword Search:
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Reference
:
G. E. Atilla-Gokcumen, N. Pagano, C. Streu, J. Maksimoska, P. Filippakopoulos, S. Knapp, E. Meggers
Extremely Tight Binding Of A Ruthenium Complex To Glycogen Synthase Kinase 3.
Chembiochem V. 9 2933 2008
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: RUTHENIUM PYRIDOCARBAZOLE (AG1a)
1b: RUTHENIUM PYRIDOCARBAZOLE (AG1b)
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No.
Name
Count
Type
Full Name
1
AG1
1
Ligand/Ion
RUTHENIUM PYRIDOCARBAZOLE
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ILE A:62 , GLY A:63 , PHE A:67 , VAL A:70 , ALA A:83 , LYS A:85 , LEU A:132 , ASP A:133 , TYR A:134 , VAL A:135 , PRO A:136 , GLU A:137 , THR A:138 , GLN A:185 , ASN A:186 , LEU A:188 , ASP A:200 , HOH A:2020 , HOH A:2085
BINDING SITE FOR RESIDUE AG1 A1385
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:62-86)
2: PROTEIN_KINASE_ST (A:177-189)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
GSK3B_HUMAN
62-86
1
A:62-86
-
2
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
GSK3B_HUMAN
177-189
1
A:177-189
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2jlda_ (A:)
1b: SCOP_d2jldb_ (B:)
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(
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
Glycogen synthase kinase-3 beta (Gsk3b)
(35)
Human (Homo sapiens) [TaxId: 9606]
(35)
1a
d2jlda_
A:
1b
d2jldb_
B:
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_2jldB01 (B:40-136)
1b: CATH_2jldA01 (A:53-136)
2a: CATH_2jldA02 (A:137-355)
2b: CATH_2jldB02 (B:137-384)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
Human (Homo sapiens)
(1036)
1a
2jldB01
B:40-136
1b
2jldA01
A:53-136
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
Human (Homo sapiens)
(1049)
2a
2jldA02
A:137-355
2b
2jldB02
B:137-384
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Pkinase_2jldB01 (B:56-340)
1b: PFAM_Pkinase_2jldB02 (B:56-340)
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Clan
:
PKinase
(934)
Family
:
Pkinase
(680)
Homo sapiens (Human)
(521)
1a
Pkinase-2jldB01
B:56-340
1b
Pkinase-2jldB02
B:56-340
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Show PDB file:
Asym.Unit (126 KB)
Header - Asym.Unit
Biol.Unit 1 (117 KB)
Header - Biol.Unit 1
Biol.Unit 2 (60 KB)
Header - Biol.Unit 2
Biol.Unit 3 (61 KB)
Header - Biol.Unit 3
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