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2JJB
Asym. Unit
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Asym.Unit (379 KB)
Biol.Unit 1 (192 KB)
Biol.Unit 2 (186 KB)
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(1)
Title
:
FAMILY 37 TREHALASE FROM ESCHERICHIA COLI IN COMPLEX WITH CASUARINE-6-O-ALPHA-GLUCOPYRANOSE
Authors
:
T. M. Gloster, S. Roberts, G. J. Davies, F. Cardona, C. Parmeggiani, C. Bonaccini, P. Gratteri, L. Sim, D. R. Rose, A. Goti
Date
:
28 Mar 08 (Deposition) - 13 Jan 09 (Release) - 20 Apr 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Keywords
:
Hydrolase, Glycosidase, Glycoside Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Cardona, C. Parmeggiani, E. Faggi, C. Bonaccini, P. Gratteri, L. Sim, T. M. Gloster, S. Roberts, G. J. Davies, D. R. Rose, A. Goti
Total Syntheses Of Casuarine And Its 6-O-Alpha- Glucoside: Complementary Inhibition Towards Glycoside Hydrolases Of The Gh31 And Gh37 Families.
Chemistry V. 15 1627 2009
[
close entry info
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Hetero Components
(4, 49)
Info
All Hetero Components
1a: CASUARINE (3CUa)
1b: CASUARINE (3CUb)
1c: CASUARINE (3CUc)
1d: CASUARINE (3CUd)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
3a: ALPHA-D-GLUCOSE (GLCa)
3b: ALPHA-D-GLUCOSE (GLCb)
3c: ALPHA-D-GLUCOSE (GLCc)
3d: ALPHA-D-GLUCOSE (GLCd)
4a: SULFATE ION (SO4a)
4aa: SULFATE ION (SO4aa)
4ab: SULFATE ION (SO4ab)
4ac: SULFATE ION (SO4ac)
4ad: SULFATE ION (SO4ad)
4ae: SULFATE ION (SO4ae)
4af: SULFATE ION (SO4af)
4ag: SULFATE ION (SO4ag)
4ah: SULFATE ION (SO4ah)
4ai: SULFATE ION (SO4ai)
4aj: SULFATE ION (SO4aj)
4ak: SULFATE ION (SO4ak)
4al: SULFATE ION (SO4al)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
4e: SULFATE ION (SO4e)
4f: SULFATE ION (SO4f)
4g: SULFATE ION (SO4g)
4h: SULFATE ION (SO4h)
4i: SULFATE ION (SO4i)
4j: SULFATE ION (SO4j)
4k: SULFATE ION (SO4k)
4l: SULFATE ION (SO4l)
4m: SULFATE ION (SO4m)
4n: SULFATE ION (SO4n)
4o: SULFATE ION (SO4o)
4p: SULFATE ION (SO4p)
4q: SULFATE ION (SO4q)
4r: SULFATE ION (SO4r)
4s: SULFATE ION (SO4s)
4t: SULFATE ION (SO4t)
4u: SULFATE ION (SO4u)
4v: SULFATE ION (SO4v)
4w: SULFATE ION (SO4w)
4x: SULFATE ION (SO4x)
4y: SULFATE ION (SO4y)
4z: SULFATE ION (SO4z)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
3CU
4
Ligand/Ion
CASUARINE
2
EDO
3
Ligand/Ion
1,2-ETHANEDIOL
3
GLC
4
Ligand/Ion
ALPHA-D-GLUCOSE
4
SO4
38
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(49, 49)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PHE A:153 , TYR A:157 , TRP A:159 , ASP A:160 , GLN A:207 , GLY A:310 , ASP A:312 , GLN A:446 , TRP A:447 , TYR A:512 , PHE A:518 , TRP A:520 , GLC A:1548 , HOH A:2345 , HOH A:2461
BINDING SITE FOR RESIDUE 3CU A1547
02
AC2
SOFTWARE
ARG A:152 , TYR A:157 , ASN A:196 , TYR A:202 , ARG A:205 , GLN A:207 , ARG A:277 , GLU A:279 , ALA A:307 , ASP A:312 , TYR A:512 , 3CU A:1547 , SO4 A:1549 , HOH A:2343
BINDING SITE FOR RESIDUE GLC A1548
03
AC3
SOFTWARE
PHE B:153 , TYR B:157 , TRP B:159 , ASP B:160 , GLN B:207 , GLY B:310 , ASP B:312 , TRP B:447 , PHE B:518 , TRP B:520 , GLC B:1546 , HOH B:2289 , HOH B:2409
BINDING SITE FOR RESIDUE 3CU B1545
04
AC4
SOFTWARE
ARG B:152 , TYR B:157 , ASN B:196 , TYR B:202 , ARG B:205 , GLN B:207 , ARG B:277 , GLU B:279 , SER B:280 , ALA B:307 , ASP B:312 , 3CU B:1545 , SO4 B:1547 , HOH B:2288
BINDING SITE FOR RESIDUE GLC B1546
05
AC5
SOFTWARE
PHE C:153 , TYR C:157 , TRP C:159 , ASP C:160 , GLN C:207 , GLY C:310 , ASP C:312 , TRP C:447 , TYR C:512 , PHE C:518 , TRP C:520 , GLC C:1547 , HOH C:2293 , HOH C:2404
BINDING SITE FOR RESIDUE 3CU C1546
06
AC6
SOFTWARE
ARG C:152 , PHE C:153 , TYR C:157 , ASN C:196 , TYR C:202 , ARG C:205 , GLN C:207 , ARG C:277 , GLU C:279 , ALA C:307 , ASP C:312 , 3CU C:1546 , SO4 C:1548 , HOH C:2291
BINDING SITE FOR RESIDUE GLC C1547
07
AC7
SOFTWARE
PHE D:153 , TRP D:159 , ASP D:160 , GLN D:207 , GLY D:310 , ASP D:312 , TRP D:447 , TYR D:512 , PHE D:518 , TRP D:520 , GLC D:1548 , HOH D:2236 , HOH D:2330
BINDING SITE FOR RESIDUE 3CU D1547
08
AC8
SOFTWARE
ARG D:152 , TYR D:157 , ASN D:196 , TYR D:202 , ARG D:205 , GLN D:207 , ARG D:277 , GLU D:279 , SER D:280 , ALA D:307 , ASP D:312 , 3CU D:1547 , SO4 D:1549 , HOH D:2331
BINDING SITE FOR RESIDUE GLC D1548
09
AC9
SOFTWARE
ARG A:277 , SER A:280 , ASP A:312 , PHE A:313 , TYR A:512 , GLC A:1548 , HOH A:2345 , HOH A:2501 , HOH A:2502
BINDING SITE FOR RESIDUE SO4 A1549
10
BC1
SOFTWARE
ARG B:277 , SER B:280 , ASP B:312 , PHE B:313 , GLC B:1546 , HOH B:2289 , HOH B:2447 , HOH B:2448
BINDING SITE FOR RESIDUE SO4 B1547
11
BC2
SOFTWARE
ARG C:277 , SER C:280 , ASP C:312 , PHE C:313 , TYR C:512 , GLC C:1547 , HOH C:2293 , HOH C:2439 , HOH C:2441
BINDING SITE FOR RESIDUE SO4 C1548
12
BC3
SOFTWARE
ARG D:277 , SER D:280 , ASP D:312 , PHE D:313 , TYR D:512 , GLC D:1548 , HOH D:2236 , HOH D:2332 , HOH D:2333 , HOH D:2334
BINDING SITE FOR RESIDUE SO4 D1549
13
BC4
SOFTWARE
GLN B:383 , LEU C:260 , GLN C:261 , TYR C:390 , HIS C:395 , HOH C:2442 , HOH C:2443 , HOH C:2444
BINDING SITE FOR RESIDUE SO4 C1549
14
BC5
SOFTWARE
ASP A:489 , ARG A:490 , ARG C:398 , ASN C:399 , GLN C:400 , HOH C:2445 , HOH C:2446 , HOH C:2447 , HOH C:2448
BINDING SITE FOR RESIDUE SO4 C1550
15
BC6
SOFTWARE
HIS C:173 , ASP C:175 , LYS C:176 , HOH C:2167 , HOH C:2449
BINDING SITE FOR RESIDUE SO4 C1551
16
BC7
SOFTWARE
PRO A:110 , LEU B:260 , GLN B:261 , TYR B:390 , HIS B:395 , HOH B:2449 , HOH B:2450 , HOH B:2451 , HOH B:2452
BINDING SITE FOR RESIDUE SO4 B1548
17
BC8
SOFTWARE
LEU A:260 , GLN A:261 , TYR A:390 , HIS A:395 , HOH A:2503 , HOH A:2504 , HOH A:2505 , HOH A:2506
BINDING SITE FOR RESIDUE SO4 A1550
18
BC9
SOFTWARE
HIS D:173 , ASP D:175 , LYS D:176 , HOH D:2335
BINDING SITE FOR RESIDUE SO4 D1550
19
CC1
SOFTWARE
LEU D:260 , GLN D:261 , TYR D:390 , HIS D:395 , HOH D:2336 , HOH D:2337
BINDING SITE FOR RESIDUE SO4 D1551
20
CC2
SOFTWARE
LYS A:255 , ARG A:256 , ASP A:272 , HOH A:2507 , HOH A:2508 , ILE C:42 , ARG C:273
BINDING SITE FOR RESIDUE SO4 A1551
21
CC3
SOFTWARE
HIS A:173 , ASP A:175 , LYS A:176 , HOH A:2205 , HOH A:2509
BINDING SITE FOR RESIDUE SO4 A1552
22
CC4
SOFTWARE
ARG A:273 , LYS C:255 , ARG C:256 , ASP C:272 , HOH C:2187 , HOH C:2450 , HOH C:2451
BINDING SITE FOR RESIDUE SO4 C1552
23
CC5
SOFTWARE
LYS B:255 , ARG B:256 , ASP B:272 , HOH B:2177 , HOH B:2453 , ARG D:273
BINDING SITE FOR RESIDUE SO4 B1549
24
CC6
SOFTWARE
ARG B:273 , ASP D:243 , LYS D:255 , ARG D:256 , ASP D:272 , HOH D:2142 , HOH D:2338 , HOH D:2339 , HOH D:2340
BINDING SITE FOR RESIDUE SO4 D1552
25
CC7
SOFTWARE
CYS A:539 , ASP A:540 , ASN A:541 , GLN C:383
BINDING SITE FOR RESIDUE SO4 A1553
26
CC8
SOFTWARE
HIS B:173 , TRP B:174 , ASP B:175 , LYS B:176 , HOH B:2454
BINDING SITE FOR RESIDUE SO4 B1550
27
CC9
SOFTWARE
HIS B:92 , ASN B:95 , HIS B:221 , HOH B:2455
BINDING SITE FOR RESIDUE SO4 B1551
28
DC1
SOFTWARE
ASP A:224 , LYS A:228 , ARG D:128 , SER D:129
BINDING SITE FOR RESIDUE SO4 D1553
29
DC2
SOFTWARE
HIS A:479 , ARG A:546 , HOH A:2510
BINDING SITE FOR RESIDUE SO4 A1554
30
DC3
SOFTWARE
GLY C:356 , ASP C:357 , ASN C:358 , ALA C:359
BINDING SITE FOR RESIDUE SO4 C1553
31
DC4
SOFTWARE
GLU A:111 , GLY A:112 , LYS C:396
BINDING SITE FOR RESIDUE SO4 C1554
32
DC5
SOFTWARE
GLY B:356 , ASP B:357 , ASN B:358 , ALA B:359 , HOH B:2316 , HOH B:2456
BINDING SITE FOR RESIDUE SO4 B1552
33
DC6
SOFTWARE
LEU C:248 , GLN C:249 , ALA C:250 , LYS C:259 , HOH C:2452 , HOH C:2453 , HOH C:2455
BINDING SITE FOR RESIDUE SO4 C1555
34
DC7
SOFTWARE
GLN A:249 , ALA A:250 , LYS A:259 , HOH A:2512
BINDING SITE FOR RESIDUE SO4 A1555
35
DC8
SOFTWARE
ASP A:382 , ASP A:417 , ARG A:418 , HOH A:2410
BINDING SITE FOR RESIDUE SO4 A1556
36
DC9
SOFTWARE
CYS C:539 , ASP C:540 , ASN C:541 , HOH C:2456
BINDING SITE FOR RESIDUE SO4 C1556
37
EC1
SOFTWARE
PRO A:513 , LEU A:514 , HOH A:2513 , HOH A:2515
BINDING SITE FOR RESIDUE SO4 A1557
38
EC2
SOFTWARE
SER D:129 , THR D:130 , GLU D:131 , ASN D:132
BINDING SITE FOR RESIDUE SO4 D1554
39
EC3
SOFTWARE
ARG D:398 , ASN D:399 , GLN D:400 , HOH D:2269 , HOH D:2342
BINDING SITE FOR RESIDUE SO4 D1555
40
EC4
SOFTWARE
ARG B:398 , ASN B:399 , GLN B:400 , HOH B:2458 , HOH B:2459
BINDING SITE FOR RESIDUE SO4 B1553
41
EC5
SOFTWARE
HIS C:92 , ASN C:95 , HOH C:2457
BINDING SITE FOR RESIDUE SO4 C1557
42
EC6
SOFTWARE
GLY D:112 , LYS D:492 , HOH D:2343
BINDING SITE FOR RESIDUE SO4 D1556
43
EC7
SOFTWARE
ASN B:358 , HOH B:2318 , SER C:129 , THR C:130 , GLU C:131 , ASN C:132
BINDING SITE FOR RESIDUE SO4 C1558
44
EC8
SOFTWARE
LEU A:213 , LYS A:343 , TYR A:410 , VAL A:411 , HOH A:2516 , HOH A:2517
BINDING SITE FOR RESIDUE SO4 A1558
45
EC9
SOFTWARE
PRO A:534 , LYS A:535 , HOH A:2518 , HOH A:2520
BINDING SITE FOR RESIDUE SO4 A1559
46
FC1
SOFTWARE
ARG A:398 , ASN A:399 , GLN A:400 , HOH A:2397 , HOH A:2522
BINDING SITE FOR RESIDUE SO4 A1560
47
FC2
SOFTWARE
GLN B:235 , TYR B:364 , HOH B:2460 , HOH B:2461 , ARG D:80
BINDING SITE FOR RESIDUE EDO B1554
48
FC3
SOFTWARE
ALA A:544 , GLN C:400 , LEU C:401 , HIS C:429 , HOH C:2378 , HOH C:2458
BINDING SITE FOR RESIDUE EDO C1559
49
FC4
SOFTWARE
HIS A:486 , ARG A:490 , HOH A:2468 , HOH A:2523 , PRO C:321 , HOH C:2296 , HOH C:2445
BINDING SITE FOR RESIDUE EDO A1561
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
[
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PROSITE Patterns/Profiles
(2, 8)
Info
All PROSITE Patterns/Profiles
1: TREHALASE_1 (A:149-162,B:149-162,C:149-162,D:14...)
2: TREHALASE_2 (A:446-455,B:446-455,C:446-455,D:44...)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TREHALASE_1
PS00927
Trehalase signature 1.
TREA_ECOLI
149-162
4
A:149-162
B:149-162
C:149-162
D:149-162
2
TREHALASE_2
PS00928
Trehalase signature 2.
TREA_ECOLI
446-455
4
A:446-455
B:446-455
C:446-455
D:446-455
[
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]
Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d2jjba_ (A:)
1b: SCOP_d2jjbb_ (B:)
1c: SCOP_d2jjbc_ (C:)
1d: SCOP_d2jjbd_ (D:)
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Class
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All alpha proteins
(14657)
Fold
:
alpha/alpha toroid
(324)
Superfamily
:
Six-hairpin glycosidases
(109)
Family
:
Trehalase-like
(4)
Protein domain
:
automated matches
(3)
Escherichia coli K-12 [TaxId: 83333]
(3)
1a
d2jjba_
A:
1b
d2jjbb_
B:
1c
d2jjbc_
C:
1d
d2jjbd_
D:
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all CATH domains
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_Trehalase_2jjbD01 (D:55-533)
1b: PFAM_Trehalase_2jjbD02 (D:55-533)
1c: PFAM_Trehalase_2jjbD03 (D:55-533)
1d: PFAM_Trehalase_2jjbD04 (D:55-533)
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Clan
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6_Hairpin
(120)
Family
:
Trehalase
(5)
Escherichia coli (strain K12)
(4)
1a
Trehalase-2jjbD01
D:55-533
1b
Trehalase-2jjbD02
D:55-533
1c
Trehalase-2jjbD03
D:55-533
1d
Trehalase-2jjbD04
D:55-533
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