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2JGC
Asym. Unit
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Asym.Unit (37 KB)
Biol.Unit 1 (33 KB)
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(1)
Title
:
STRUCTURE OF THE HUMAN EIF4E HOMOLOGOUS PROTEIN, 4EHP WITHOUT LIGAND BOUND
Authors
:
A. D. Cameron, P. Rosettani, S. Knapp, M. G. Vismara, L. Rusconi
Date
:
12 Feb 07 (Deposition) - 27 Feb 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Phosphorylation, Initiation Factor, 4Ehp, Eif4E, Rna- Binding, Acetylation, Cap-Binding, Eukaryotic Initiation Factor, Protein Synthesis Inhibitor, Translation, Protein Biosynthesis, Translation Regulation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Rosettani, S. Knapp, M. G. Vismara, L. Rusconi, A. D. Cameron
Structures Of The Human Eif4E Homologous Protein, H4Ehp, In Its M(7)Gtp-Bound And Unliganded Forms.
J. Mol. Biol. V. 368 691 2007
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: IF4E (A:112-135)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
IF4E
PS00813
Eukaryotic initiation factor 4E signature.
IF4E2_HUMAN
112-135
1
A:112-135
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Exons
(6, 6)
Info
All Exons
Exon 1.6a (A:47-90 (gaps))
Exon 1.7 (A:91-125)
Exon 1.8a (A:126-176)
Exon 1.9b (A:177-219)
Exon 1.10b (A:228-234)
Exon 2.3 (B:51-67)
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All Exon Boundaries
1: Boundary 1.4a/1.6a
2: Boundary 1.6a/1.7
3: Boundary 1.7/1.8a
4: Boundary 1.8a/1.9b
5: Boundary 1.9b/1.10b
6: Boundary 1.10b/-
7: Boundary 2.1/2.3
8: Boundary 2.3/2.4
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000258416
1a
ENSE00001934746
chr2:
233414762-233415454
693
IF4E2_HUMAN
1-7
7
0
-
-
1.4a
ENST00000258416
4a
ENSE00000844043
chr2:
233421126-233421240
115
IF4E2_HUMAN
7-45
39
0
-
-
1.6a
ENST00000258416
6a
ENSE00000572172
chr2:
233422594-233422728
135
IF4E2_HUMAN
46-90
45
1
A:47-90 (gaps)
44
1.7
ENST00000258416
7
ENSE00000786783
chr2:
233428957-233429061
105
IF4E2_HUMAN
91-125
35
1
A:91-125
35
1.8a
ENST00000258416
8a
ENSE00001073151
chr2:
233431539-233431691
153
IF4E2_HUMAN
126-176
51
1
A:126-176
51
1.9b
ENST00000258416
9b
ENSE00001073149
chr2:
233431788-233431924
137
IF4E2_HUMAN
177-222
46
1
A:177-219
43
1.10b
ENST00000258416
10b
ENSE00001073152
chr2:
233433655-233433920
266
IF4E2_HUMAN
222-245
24
1
A:228-234
7
2.1
ENST00000338825
1
ENSE00001381442
chr8:
37887859-37888236
378
4EBP1_HUMAN
1-49
49
0
-
-
2.3
ENST00000338825
3
ENSE00001378569
chr8:
37914599-37914778
180
4EBP1_HUMAN
49-109
61
1
B:51-67
17
2.4
ENST00000338825
4
ENSE00002136838
chr8:
37917422-37917883
462
4EBP1_HUMAN
109-118
10
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2jgca_ (A:)
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(
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Folds
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)
(
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)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
eIF4e-like
(28)
Superfamily
:
eIF4e-like
(28)
Family
:
automated matches
(10)
Protein domain
:
automated matches
(10)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d2jgca_
A:
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CATH Domains
(0, 0)
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_IF4E_2jgcA01 (A:55-217)
2a: PFAM_eIF_4EBP_2jgcB01 (B:51-67)
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Clan
:
no clan defined [family: IF4E]
(10)
Family
:
IF4E
(10)
Homo sapiens (Human)
(7)
1a
IF4E-2jgcA01
A:55-217
Clan
:
no clan defined [family: eIF_4EBP]
(6)
Family
:
eIF_4EBP
(6)
Homo sapiens (Human)
(6)
2a
eIF_4EBP-2jgcB01
B:51-67
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