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2JFR
Asym. Unit
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Asym.Unit (105 KB)
Biol.Unit 1 (100 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE PPM SER-THR PHOSPHATASE MSPP FROM MYCOBACTERIUM SMEGMATIS IN COMPLEX WITH PHOSPHATE AT 0.83 A RESOLUTION
Authors
:
M. Bellinzoni, A. Wehenkel, W. Shepard, P. M. Alzari
Date
:
04 Feb 07 (Deposition) - 24 Jul 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
0.83
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Hydrolase, Ppm Phosphatase, Mycobacterium, Manganese, Phosphate
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
M. Bellinzoni, A. Wehenkel, W. Shepard, P. M. Alzari
Insights Into The Mechanism Of Ppm Ser/Thr Phosphatases From The Atomic Resolution Structures Of A Mycobacterial Enzyme
Structure V. 15 863 2007
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Hetero Components
(4, 7)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
2c: MAGNESIUM ION (MGc)
2d: MAGNESIUM ION (MGd)
3a: MANGANESE (II) ION (MNa)
4a: PHOSPHATE ION (PO4a)
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No.
Name
Count
Type
Full Name
1
CL
1
Ligand/Ion
CHLORIDE ION
2
MG
4
Ligand/Ion
MAGNESIUM ION
3
MN
1
Ligand/Ion
MANGANESE (II) ION
4
PO4
1
Ligand/Ion
PHOSPHATE ION
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:35 , GLY A:36 , PO4 A:1239 , HOH A:2091 , HOH A:2131 , HOH A:2486 , HOH A:2487
BINDING SITE FOR RESIDUE MG A1234
2
AC2
SOFTWARE
ASP A:35 , ASP A:185 , ASP A:223 , MG A:1236 , PO4 A:1239 , HOH A:2485 , HOH A:2486 , HOH A:2488
BINDING SITE FOR RESIDUE MN A1235
3
AC3
SOFTWARE
ASP A:111 , ASP A:185 , MN A:1235 , PO4 A:1239 , HOH A:2287 , HOH A:2288 , HOH A:2411 , HOH A:2488 , HOH A:2493
BINDING SITE FOR RESIDUE MG A1236
4
AC4
SOFTWARE
ASP A:185 , HOH A:2361 , HOH A:2363 , HOH A:2365 , HOH A:2410 , HOH A:2411 , HOH A:2412
BINDING SITE FOR RESIDUE MG A1237
5
AC5
SOFTWARE
GLY A:14 , PRO A:15 , ASN A:217 , HOH A:2047 , HOH A:2305
BINDING SITE FOR RESIDUE CL A1238
6
AC6
SOFTWARE
ARG A:17 , ASP A:35 , GLY A:36 , PHE A:37 , ASP A:185 , ASP A:223 , MG A:1234 , MN A:1235 , MG A:1236 , HOH A:2091 , HOH A:2287 , HOH A:2411 , HOH A:2486 , HOH A:2487 , HOH A:2488 , HOH A:2489 , HOH A:2490 , HOH A:2491 , HOH A:2492 , HOH A:2493
BINDING SITE FOR RESIDUE PO4 A1239
7
AC7
SOFTWARE
HOH A:2025 , HOH A:2026 , HOH A:2052 , HOH A:2054 , HOH A:2056 , HOH A:2423
BINDING SITE FOR RESIDUE MG A1240
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2jfra_ (A:)
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)
Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
PP2C-like
(16)
Superfamily
:
PP2C-like
(16)
Family
:
automated matches
(9)
Protein domain
:
automated matches
(9)
Mycobacterium smegmatis [TaxId: 246196]
(3)
1a
d2jfra_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2jfrA00 (A:0-233)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
4-Layer Sandwich
(459)
Topology
:
Phosphatase 2c; domain 1
(23)
Homologous Superfamily
:
Phosphatase 2c; Domain 1
(23)
Mycobacterium smegmatis. Organism_taxid: 246196. Strain: mc2 155.
(3)
1a
2jfrA00
A:0-233
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_PP2C_2_2jfrA01 (A:13-223)
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Clans
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Clan
:
PP2C
(22)
Family
:
PP2C_2
(7)
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
(4)
1a
PP2C_2-2jfrA01
A:13-223
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Chain A
Asymmetric Unit 1
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