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2JC3
Biol. Unit 1
Info
Asym.Unit (377 KB)
Biol.Unit 1 (97 KB)
Biol.Unit 2 (97 KB)
Biol.Unit 3 (98 KB)
Biol.Unit 4 (97 KB)
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(1)
Title
:
STRUCTURE OF O-ACETYLSERINE SULFHYDRYLASE B FROM SALMONELLA TYPHIMURIUM
Authors
:
A. Chattopadhyay, W. M. Rabeh, F. Speroni, M. Meier, S. Ivaninskii, A. Mozzarelli, P. Burkhard, P. F. Cook
Date
:
19 Dec 06 (Deposition) - 23 Jan 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Keywords
:
Transferase, Sulfhydrylase, Pyridoxal Phosphate, Vitamin B6 Dependent Enzyme, Cysteine Biosynthesis, Amino-Acid Biosynthesis
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Chattopadhyay, M. Meier, S. Ivaninskii, P. Burkhard, F. Speroni, B. Campanini, S. Bettati, A. Mozzarelli, W. M. Rabeh, L. Li, P. F. Cook
Structure, Mechanism, And Conformational Dynamics Of O-Acetylserine Sulfhydrylase From Salmonella Typhimurium: Comparison Of A And B Isozymes.
Biochemistry V. 46 8315 2007
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: PYRIDOXAL-5'-PHOSPHATE (PLPa)
1b: PYRIDOXAL-5'-PHOSPHATE (PLPb)
1c: PYRIDOXAL-5'-PHOSPHATE (PLPc)
1d: PYRIDOXAL-5'-PHOSPHATE (PLPd)
1e: PYRIDOXAL-5'-PHOSPHATE (PLPe)
1f: PYRIDOXAL-5'-PHOSPHATE (PLPf)
1g: PYRIDOXAL-5'-PHOSPHATE (PLPg)
1h: PYRIDOXAL-5'-PHOSPHATE (PLPh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
PLP
2
Ligand/Ion
PYRIDOXAL-5'-PHOSPHATE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LYS A:41 , ASN A:71 , SER A:172 , GLY A:174 , THR A:175 , THR A:176 , GLY A:177 , THR A:178 , ILE A:209 , SER A:255 , CYS A:280 , ASP A:281 , TYR A:286 , HOH A:2038 , HOH A:2044 , HOH A:2074
BINDING SITE FOR RESIDUE PLP A1294
2
AC2
SOFTWARE
LYS B:41 , ASN B:71 , SER B:172 , GLY B:174 , THR B:175 , THR B:176 , GLY B:177 , THR B:178 , GLY B:208 , ILE B:209 , SER B:255 , CYS B:280 , ASP B:281 , TYR B:286 , HOH B:2061 , HOH B:2089 , HOH B:2090 , HOH B:2091
BINDING SITE FOR RESIDUE PLP B1294
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: CYS_SYNTHASE (A:30-48,B:30-48)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CYS_SYNTHASE
PS00901
Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site.
CYSM_SALTY
30-48
2
A:30-48
B:30-48
-
-
-
-
-
-
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d2jc3a_ (A:)
1b: SCOP_d2jc3b_ (B:)
1c: SCOP_d2jc3c_ (C:)
1d: SCOP_d2jc3d_ (D:)
1e: SCOP_d2jc3e_ (E:)
1f: SCOP_d2jc3f_ (F:)
1g: SCOP_d2jc3g_ (G:)
1h: SCOP_d2jc3h_ (H:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Tryptophan synthase beta subunit-like PLP-dependent enzymes
(165)
Superfamily
:
Tryptophan synthase beta subunit-like PLP-dependent enzymes
(165)
Family
:
Tryptophan synthase beta subunit-like PLP-dependent enzymes
(120)
Protein domain
:
automated matches
(33)
Salmonella typhimurium [TaxId: 90371]
(13)
1a
d2jc3a_
A:
1b
d2jc3b_
B:
1c
d2jc3c_
C:
1d
d2jc3d_
D:
1e
d2jc3e_
E:
1f
d2jc3f_
F:
1g
d2jc3g_
G:
1h
d2jc3h_
H:
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CATH Domains
(1, 16)
Info
all CATH domains
1a: CATH_2jc3A01 (A:1-34,A:154-294)
1b: CATH_2jc3B01 (B:1-34,B:154-294)
1c: CATH_2jc3C01 (C:1-34,C:154-294)
1d: CATH_2jc3D01 (D:1-34,D:154-294)
1e: CATH_2jc3E01 (E:1-34,E:154-294)
1f: CATH_2jc3F01 (F:1-34,F:154-294)
1g: CATH_2jc3G01 (G:1-34,G:154-294)
1h: CATH_2jc3H01 (H:1-34,H:154-294)
1i: CATH_2jc3A02 (A:35-140)
1j: CATH_2jc3B02 (B:35-140)
1k: CATH_2jc3C02 (C:35-140)
1l: CATH_2jc3D02 (D:35-140)
1m: CATH_2jc3E02 (E:35-140)
1n: CATH_2jc3F02 (F:35-140)
1o: CATH_2jc3G02 (G:35-140)
1p: CATH_2jc3H02 (H:35-140)
View:
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)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.1100, no name defined]
(77)
Salmonella typhimurium. Organism_taxid: 602.
(13)
1a
2jc3A01
A:1-34,A:154-294
1b
2jc3B01
B:1-34,B:154-294
1c
2jc3C01
C:1-34,C:154-294
1d
2jc3D01
D:1-34,D:154-294
1e
2jc3E01
E:1-34,E:154-294
1f
2jc3F01
F:1-34,F:154-294
1g
2jc3G01
G:1-34,G:154-294
1h
2jc3H01
H:1-34,H:154-294
1i
2jc3A02
A:35-140
1j
2jc3B02
B:35-140
1k
2jc3C02
C:35-140
1l
2jc3D02
D:35-140
1m
2jc3E02
E:35-140
1n
2jc3F02
F:35-140
1o
2jc3G02
G:35-140
1p
2jc3H02
H:35-140
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Pfam Domains
(1, 8)
Info
all PFAM domains
1a: PFAM_PALP_2jc3H01 (H:4-281)
1b: PFAM_PALP_2jc3H02 (H:4-281)
1c: PFAM_PALP_2jc3H03 (H:4-281)
1d: PFAM_PALP_2jc3H04 (H:4-281)
1e: PFAM_PALP_2jc3H05 (H:4-281)
1f: PFAM_PALP_2jc3H06 (H:4-281)
1g: PFAM_PALP_2jc3H07 (H:4-281)
1h: PFAM_PALP_2jc3H08 (H:4-281)
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Clans
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)
(
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(
)
Organisms
(
)
(
)
Clan
:
no clan defined [family: PALP]
(67)
Family
:
PALP
(67)
Salmonella typhimurium
(25)
1a
PALP-2jc3H01
H:4-281
1b
PALP-2jc3H02
H:4-281
1c
PALP-2jc3H03
H:4-281
1d
PALP-2jc3H04
H:4-281
1e
PALP-2jc3H05
H:4-281
1f
PALP-2jc3H06
H:4-281
1g
PALP-2jc3H07
H:4-281
1h
PALP-2jc3H08
H:4-281
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Asymmetric Unit 1
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Asym.Unit (377 KB)
Header - Asym.Unit
Biol.Unit 1 (97 KB)
Header - Biol.Unit 1
Biol.Unit 2 (97 KB)
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Biol.Unit 3 (98 KB)
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Biol.Unit 4 (97 KB)
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