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2JBM
Biol. Unit 1
Info
Asym.Unit (567 KB)
Biol.Unit 1 (289 KB)
Biol.Unit 2 (275 KB)
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(1)
Title
:
QPRTASE STRUCTURE FROM HUMAN
Authors
:
H. Liu, J. H. Naismith
Date
:
08 Dec 06 (Deposition) - 13 Nov 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C,D,E,F (1x)
Biol. Unit 2: G,H,I,J,K,L (1x)
Keywords
:
Nad, Enzyme, Metabolism, Transferase, Polymorphism, Glycosyltransferase, Pyridine Nucleotide Biosynthesis
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Liu, K. Woznica, G. Catton, A. Crawford, N. Bottinf, J. H. Naismith
Structural And Kinetic Characterization Of Quinolinate Phosphoribosyltransferase (Hqprtase) From Homo Sapiens.
J. Mol. Biol. V. 373 755 2007
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Hetero Components
(1, 6)
Info
All Hetero Components
1a: S,R MESO-TARTARIC ACID (SRTa)
1b: S,R MESO-TARTARIC ACID (SRTb)
1c: S,R MESO-TARTARIC ACID (SRTc)
1d: S,R MESO-TARTARIC ACID (SRTd)
1e: S,R MESO-TARTARIC ACID (SRTe)
1f: S,R MESO-TARTARIC ACID (SRTf)
1g: S,R MESO-TARTARIC ACID (SRTg)
1h: S,R MESO-TARTARIC ACID (SRTh)
1i: S,R MESO-TARTARIC ACID (SRTi)
1j: S,R MESO-TARTARIC ACID (SRTj)
1k: S,R MESO-TARTARIC ACID (SRTk)
1l: S,R MESO-TARTARIC ACID (SRTl)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
SRT
6
Ligand/Ion
S,R MESO-TARTARIC ACID
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR A:139 , ARG A:140 , ARG A:163 , LYS A:173 , HOH A:2216 , HOH A:2374 , HOH A:2375 , ARG B:104
BINDING SITE FOR RESIDUE SRT A 401
2
AC2
SOFTWARE
ARG A:104 , THR B:139 , ARG B:140 , ARG B:163 , LYS B:173 , HOH B:2321 , HOH B:2322 , HOH B:2323
BINDING SITE FOR RESIDUE SRT B 401
3
AC3
SOFTWARE
THR C:139 , ARG C:140 , ARG C:163 , LYS C:173 , HOH C:2168 , HOH C:2280 , ARG D:104
BINDING SITE FOR RESIDUE SRT C 401
4
AC4
SOFTWARE
ARG C:104 , THR D:139 , ARG D:140 , ARG D:163 , LYS D:173 , HOH D:2172 , HOH D:2290 , HOH D:2291 , HOH D:2292
BINDING SITE FOR RESIDUE SRT D 401
5
AC5
SOFTWARE
THR E:139 , ARG E:140 , ARG E:163 , LYS E:173 , HOH E:2155 , HOH E:2266 , ARG F:104
BINDING SITE FOR RESIDUE SRT E 401
6
AC6
SOFTWARE
ARG E:104 , THR F:139 , ARG F:140 , LYS F:141 , ARG F:163 , LYS F:173 , HOH F:2314 , HOH F:2315
BINDING SITE FOR RESIDUE SRT F 401
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SAPs(SNPs)/Variants
(2, 12)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_021915 (A160V, chain A/B/C/D/E/F, )
2: VAR_050219 (A197A, chain A/B/C/D/E/F, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_021915
A
158
V
NADC_HUMAN
Polymorphism
2303255
A/B/C/D/E/F
A
160
V
2
UniProt
VAR_050219
T
195
A
NADC_HUMAN
Polymorphism
9932770
A/B/C/D/E/F
A
197
A
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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End label:
Sorry, no Info available
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
All SCOP Domains
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(2, 24)
Info
all PFAM domains
1a: PFAM_QRPTase_N_2jbmL01 (L:31-114)
1b: PFAM_QRPTase_N_2jbmL02 (L:31-114)
1c: PFAM_QRPTase_N_2jbmL03 (L:31-114)
1d: PFAM_QRPTase_N_2jbmL04 (L:31-114)
1e: PFAM_QRPTase_N_2jbmL05 (L:31-114)
1f: PFAM_QRPTase_N_2jbmL06 (L:31-114)
1g: PFAM_QRPTase_N_2jbmL07 (L:31-114)
1h: PFAM_QRPTase_N_2jbmL08 (L:31-114)
1i: PFAM_QRPTase_N_2jbmL09 (L:31-114)
1j: PFAM_QRPTase_N_2jbmL10 (L:31-114)
1k: PFAM_QRPTase_N_2jbmL11 (L:31-114)
1l: PFAM_QRPTase_N_2jbmL12 (L:31-114)
2a: PFAM_QRPTase_C_2jbmL13 (L:116-286)
2b: PFAM_QRPTase_C_2jbmL14 (L:116-286)
2c: PFAM_QRPTase_C_2jbmL15 (L:116-286)
2d: PFAM_QRPTase_C_2jbmL16 (L:116-286)
2e: PFAM_QRPTase_C_2jbmL17 (L:116-286)
2f: PFAM_QRPTase_C_2jbmL18 (L:116-286)
2g: PFAM_QRPTase_C_2jbmL19 (L:116-286)
2h: PFAM_QRPTase_C_2jbmL20 (L:116-286)
2i: PFAM_QRPTase_C_2jbmL21 (L:116-286)
2j: PFAM_QRPTase_C_2jbmL22 (L:116-286)
2k: PFAM_QRPTase_C_2jbmL23 (L:116-286)
2l: PFAM_QRPTase_C_2jbmL24 (L:116-286)
View:
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Clans
(
)
(
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Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
Hybrid
(58)
Family
:
QRPTase_N
(10)
Homo sapiens (Human)
(1)
1a
QRPTase_N-2jbmL01
L:31-114
1b
QRPTase_N-2jbmL02
L:31-114
1c
QRPTase_N-2jbmL03
L:31-114
1d
QRPTase_N-2jbmL04
L:31-114
1e
QRPTase_N-2jbmL05
L:31-114
1f
QRPTase_N-2jbmL06
L:31-114
1g
QRPTase_N-2jbmL07
L:31-114
1h
QRPTase_N-2jbmL08
L:31-114
1i
QRPTase_N-2jbmL09
L:31-114
1j
QRPTase_N-2jbmL10
L:31-114
1k
QRPTase_N-2jbmL11
L:31-114
1l
QRPTase_N-2jbmL12
L:31-114
Clan
:
TIM_barrel
(694)
Family
:
QRPTase_C
(10)
Homo sapiens (Human)
(1)
2a
QRPTase_C-2jbmL13
L:116-286
2b
QRPTase_C-2jbmL14
L:116-286
2c
QRPTase_C-2jbmL15
L:116-286
2d
QRPTase_C-2jbmL16
L:116-286
2e
QRPTase_C-2jbmL17
L:116-286
2f
QRPTase_C-2jbmL18
L:116-286
2g
QRPTase_C-2jbmL19
L:116-286
2h
QRPTase_C-2jbmL20
L:116-286
2i
QRPTase_C-2jbmL21
L:116-286
2j
QRPTase_C-2jbmL22
L:116-286
2k
QRPTase_C-2jbmL23
L:116-286
2l
QRPTase_C-2jbmL24
L:116-286
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Asymmetric Unit 1
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Asym.Unit (567 KB)
Header - Asym.Unit
Biol.Unit 1 (289 KB)
Header - Biol.Unit 1
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Header - Biol.Unit 2
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