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2JA1
Asym. Unit
Info
Asym.Unit (37 KB)
Biol.Unit 1 (123 KB)
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(1)
Title
:
THYMIDINE KINASE FROM B. CEREUS WITH TTP BOUND AS PHOSPHATE DONOR.
Authors
:
U. Kosinska, C. Carnrot, M. P. B. Sandrini, A. R. Clausen, L. Wang, J. Pis S. Eriksson, H. Eklund
Date
:
17 Nov 06 (Deposition) - 23 Jan 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A
Biol. Unit 1: A (4x)
Keywords
:
Tk1, Dnk, Lasso, Kinase, Transferase, Phosphate Donor, Deoxyribonucleoside Kinase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
U. Kosinska, C. Carnrot, M. P. B. Sandrini, A. R. Clausen, L. Wang, J. Piskur, S. Eriksson, H. Eklund
Structural Studies Of Thymidine Kinases From Bacillus Anthracis And Bacillus Cereus Provide Insights Into Quaternary Structure And Conformational Changes Upon Substrate Binding
Febs J. V. 274 727 2007
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Hetero Components
(3, 3)
Info
All Hetero Components
1a: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDa)
2a: THYMIDINE-5'-TRIPHOSPHATE (TTPa)
3a: ZINC ION (ZNa)
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No.
Name
Count
Type
Full Name
1
MPD
1
Ligand/Ion
(4S)-2-METHYL-2,4-PENTANEDIOL
2
TTP
1
Ligand/Ion
THYMIDINE-5'-TRIPHOSPHATE
3
ZN
1
Ligand/Ion
ZINC ION
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:145 , CYS A:148 , CYS A:183 , CYS A:186
BINDING SITE FOR RESIDUE ZN A1192
2
AC2
SOFTWARE
SER A:16 , PHE A:18 , SER A:19 , GLY A:20 , LYS A:21 , SER A:22 , GLU A:23 , PHE A:34 , VAL A:56 , SER A:57 , HIS A:58 , ASN A:59 , ASP A:88 , GLU A:89 , VAL A:144 , HOH A:2009 , HOH A:2020
BINDING SITE FOR RESIDUE TTP A1193
3
AC3
SOFTWARE
PHE A:92 , LEU A:116 , ASP A:119 , PHE A:120 , PHE A:125 , ILE A:170 , TYR A:179
BINDING SITE FOR RESIDUE MPD A1194
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: TK_CELLULAR_TYPE (A:174-187)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TK_CELLULAR_TYPE
PS00603
Thymidine kinase cellular-type signature.
KITH_BACCR
174-187
1
A:174-187
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d2ja1a1 (A:-1-142)
2a: SCOP_d2ja1a2 (A:143-191)
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Protein Domains
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
automated matches
(303)
Protein domain
:
automated matches
(303)
Bacillus cereus [TaxId: 1396]
(1)
1a
d2ja1a1
A:-1-142
Class
:
Small proteins
(3458)
Fold
:
Glucocorticoid receptor-like (DNA-binding domain)
(292)
Superfamily
:
Glucocorticoid receptor-like (DNA-binding domain)
(292)
Family
:
automated matches
(14)
Protein domain
:
automated matches
(14)
Bacillus cereus [TaxId: 1396]
(1)
2a
d2ja1a2
A:143-191
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CATH Domains
(0, 0)
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (37 KB)
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