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2J7G
Biol. Unit 1
Info
Asym.Unit (168 KB)
Biol.Unit 1 (85 KB)
Biol.Unit 2 (81 KB)
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(1)
Title
:
BETA-GLUCOSIDASE FROM THERMOTOGA MARITIMA IN COMPLEX WITH METHYL ACETIC ACID-SUBSTITUTED GLUCOIMIDAZOLE
Authors
:
T. M. Gloster, D. Zechel, A. Vasella, G. J. Davies
Date
:
07 Oct 06 (Deposition) - 18 Oct 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.91
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Family 1, Hydrolase, Inhibitor, Glycosidase, Polysaccharide Degradation, Transition State Mimic, Carbohydrate Metabolism, Glycoside Hydrolase, Cellulose Degradation
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Reference
:
T. M. Gloster, P. Meloncelli, R. V. Stick, D. Zechel, A. Vasella, G. J. Davies
Glycosidase Inhibition: An Assessment Of The Binding Of 18 Putative Transition-State Mimics.
J. Am. Chem. Soc. V. 129 2345 2007
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
2a: CALCIUM ION (CAa)
3a: METHYL ACETIC ACID-SUBSTITUTED GLU... (GI4a)
3b: METHYL ACETIC ACID-SUBSTITUTED GLU... (GI4b)
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No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
CA
-1
Ligand/Ion
CALCIUM ION
3
GI4
1
Ligand/Ion
METHYL ACETIC ACID-SUBSTITUTED GLUCOIMIDAZOLE
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA A:54 , TYR A:421 , HOH A:2028
BINDING SITE FOR RESIDUE ACT A1447
2
AC2
SOFTWARE
HOH A:2153 , HOH A:2155 , ASP B:278 , GLU B:282 , HOH B:2212 , HOH B:2214
BINDING SITE FOR RESIDUE CA B1447
3
AC3
SOFTWARE
GLN A:20 , HIS A:121 , ASN A:165 , GLU A:166 , TYR A:295 , TRP A:324 , GLU A:351 , TRP A:398 , GLU A:405 , TRP A:406 , PHE A:414 , HOH A:2241 , HOH A:2414 , HOH A:2415 , HOH A:2416 , HOH A:2417 , HOH A:2418
BINDING SITE FOR RESIDUE GI4 A1446
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: GLYCOSYL_HYDROL_F1_2 (A:10-24)
2: GLYCOSYL_HYDROL_F1_1 (A:347-355)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GLYCOSYL_HYDROL_F1_2
PS00653
Glycosyl hydrolases family 1 N-terminal signature.
BGLA_THEMA
10-24
1
A:10-24
-
2
GLYCOSYL_HYDROL_F1_1
PS00572
Glycosyl hydrolases family 1 active site.
BGLA_THEMA
347-355
1
A:347-355
-
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Exons
(0, 0)
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2j7ga_ (A:)
1b: SCOP_d2j7gb_ (B:)
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Protein Domains
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Organisms
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(
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
(Trans)glycosidases
(1191)
Family
:
Family 1 of glycosyl hydrolase
(102)
Protein domain
:
automated matches
(36)
Thermotoga maritima [TaxId: 2336]
(20)
1a
d2j7ga_
A:
1b
d2j7gb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2j7gA00 (A:3-445)
1b: CATH_2j7gB00 (B:3-445)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Glycosidases
(843)
Thermotoga maritima. Organism_taxid: 2336.
(28)
1a
2j7gA00
A:3-445
1b
2j7gB00
B:3-445
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (168 KB)
Header - Asym.Unit
Biol.Unit 1 (85 KB)
Header - Biol.Unit 1
Biol.Unit 2 (81 KB)
Header - Biol.Unit 2
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