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2J4Z
Asym. Unit
Info
Asym.Unit (100 KB)
Biol.Unit 1 (49 KB)
Biol.Unit 2 (49 KB)
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(1)
Title
:
STRUCTURE OF AURORA-2 IN COMPLEX WITH PHA-680626
Authors
:
A. D. Cameron, G. Izzo, P. Storici, L. Rusconi, D. Fancelli, M. Varasi, D. Berta, S. Bindi, B. Forte, D. Severino, R. Tonani, P. Vianello
Date
:
08 Sep 06 (Deposition) - 06 Nov 06 (Release) - 05 May 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Transferase, Phosphorylation, Nucleotide-Binding, Kinase, Cell Cycle, Atp-Binding, Nucleotide- Binding, Serine/Threonine-Protein Kinase, Serine-Threonine-Protein Kinase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Fancelli, J. Moll, M. Varasi, R. Bravo, R. Artico, D. Berta, S. Bindi, A. D. Cameron, I. Candiani, P. Cappella, P. Carpinelli, W. Croci, B. Forte, M. L. Giorgini, J. Klapwijk, A. Marsiglio, E. Pesenti, M. Rocchetti, F. Roletto, D. Severino, C. Soncini, P. Storici, R. Tonani, P. Zugnoni, P. Vianello
1, 4, 5, 6-Tetrahydropyrrolo[3, 4-C]Pyrazoles: Identification Of A Potent Aurora Kinase Inhibitor With A Favorable Antitumor Kinase Inhibition Profile.
J. Med. Chem. V. 49 7247 2006
[
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Hetero Components
(2, 5)
Info
All Hetero Components
1a: 4-(4-METHYLPIPERAZIN-1-YL)-N-[5-(2... (626a)
1b: 4-(4-METHYLPIPERAZIN-1-YL)-N-[5-(2... (626b)
2a: ARSENIC (ARSa)
2b: ARSENIC (ARSb)
2c: ARSENIC (ARSc)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
626
2
Ligand/Ion
4-(4-METHYLPIPERAZIN-1-YL)-N-[5-(2-THIENYLACETYL)-1,5-DIHYDROPYRROLO[3,4-C]PYRAZOL-3-YL]BENZAMIDE
2
ARS
3
Ligand/Ion
ARSENIC
[
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA A:160 , LEU A:194 , GLU A:211 , TYR A:212 , ALA A:213 , PRO A:214 , GLY A:216 , ARG A:220 , GLU A:260 , LEU A:263 , ALA A:273 , HIS A:280 , HOH A:2005
BINDING SITE FOR RESIDUE 626 A1389
2
AC2
SOFTWARE
CYS A:247 , ARG A:255
BINDING SITE FOR RESIDUE ARS A1390
3
AC3
SOFTWARE
CYS A:290
BINDING SITE FOR RESIDUE ARS A1391
4
AC4
SOFTWARE
ALA A:385 , ALA B:160 , LEU B:194 , LEU B:210 , GLU B:211 , TYR B:212 , ALA B:213 , PRO B:214 , GLY B:216 , ARG B:220 , GLU B:260 , LEU B:263 , ALA B:273 , HIS B:280 , HOH B:2001 , HOH B:2084
BINDING SITE FOR RESIDUE 626 B1395
5
AC5
SOFTWARE
CYS B:247 , ARG B:255 , HOH B:2026
BINDING SITE FOR RESIDUE ARS B1396
[
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SAPs(SNPs)/Variants
(3, 6)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_041128 (S155R, chain A/B, )
2: VAR_041129 (V174M, chain A/B, )
3: VAR_041130 (M373V, chain A/B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_041128
S
155
R
AURKA_HUMAN
Unclassified
---
A/B
S
155
R
2
UniProt
VAR_041129
V
174
M
AURKA_HUMAN
Unclassified
---
A/B
V
174
M
3
UniProt
VAR_041130
M
373
V
AURKA_HUMAN
Polymorphism
33923703
A/B
M
373
V
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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]
PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:139-162,B:139-162)
2: PROTEIN_KINASE_ST (A:252-264,B:252-264)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
AURKA_HUMAN
139-162
2
A:139-162
B:139-162
2
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
AURKA_HUMAN
252-264
2
A:252-264
B:252-264
[
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Exons
(5, 10)
Info
All Exons
Exon 1.8b (A:126-189 | B:126-189)
Exon 1.9 (A:189-235 | B:189-235)
Exon 1.10b (A:236-285 | B:236-285)
Exon 1.11a (A:285-343 | B:285-343)
Exon 1.11d (A:344-389 | B:344-395)
View:
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All Exon Boundaries
1: Boundary 1.7/1.8b
2: Boundary 1.8b/1.9
3: Boundary 1.9/1.10b
4: Boundary 1.10b/1.11a
5: Boundary 1.11a/1.11d
6: Boundary 1.11d/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1d
ENST00000395914
1d
ENSE00001523255
chr20:
54967351-54967210
142
AURKA_HUMAN
-
0
0
-
-
1.2
ENST00000395914
2
ENSE00001270100
chr20:
54965721-54965612
110
AURKA_HUMAN
-
0
0
-
-
1.5b
ENST00000395914
5b
ENSE00000845695
chr20:
54963258-54963212
47
AURKA_HUMAN
1-14
14
0
-
-
1.6b
ENST00000395914
6b
ENSE00002179826
chr20:
54961589-54961313
277
AURKA_HUMAN
15-107
93
0
-
-
1.7
ENST00000395914
7
ENSE00000991660
chr20:
54959380-54959326
55
AURKA_HUMAN
107-125
19
0
-
-
1.8b
ENST00000395914
8b
ENSE00002188846
chr20:
54958232-54958041
192
AURKA_HUMAN
125-189
65
2
A:126-189
B:126-189
64
64
1.9
ENST00000395914
9
ENSE00000512389
chr20:
54956627-54956489
139
AURKA_HUMAN
189-235
47
2
A:189-235
B:189-235
47
47
1.10b
ENST00000395914
10b
ENSE00000662874
chr20:
54948612-54948464
149
AURKA_HUMAN
236-285
50
2
A:236-285
B:236-285
50
50
1.11a
ENST00000395914
11a
ENSE00000512391
chr20:
54945715-54945541
175
AURKA_HUMAN
285-343
59
2
A:285-343
B:285-343
59
59
1.11d
ENST00000395914
11d
ENSE00000845685
chr20:
54945396-54944445
952
AURKA_HUMAN
344-403
60
2
A:344-389
B:344-395
46
52
[
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2j4za_ (A:)
1b: SCOP_d2j4zb_ (B:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
automated matches
(529)
Protein domain
:
automated matches
(529)
Human (Homo sapiens) [TaxId: 9606]
(438)
1a
d2j4za_
A:
1b
d2j4zb_
B:
[
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_2j4zA01 (A:126-216)
1b: CATH_2j4zB01 (B:126-216)
2a: CATH_2j4zA02 (A:217-387)
2b: CATH_2j4zB02 (B:217-387)
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(
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
Human (Homo sapiens)
(1036)
1a
2j4zA01
A:126-216
1b
2j4zB01
B:126-216
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
Human (Homo sapiens)
(1049)
2a
2j4zA02
A:217-387
2b
2j4zB02
B:217-387
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
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Atom Selection
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Asymmetric Unit 1
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