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2J0I
Asym. Unit
Info
Asym.Unit (108 KB)
Biol.Unit 1 (103 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE HUMAN P21-ACTIVATED KINASE 4
Authors
:
J. E. Debreczeni, J. Eswaran, E. Ugochukwu, E. Papagrigoriou, A. Turnbull, F. Von Delft, C. Arrowsmith, J. Weigelt, A. Edwards, M. Sundstrom, S. Knapp
Date
:
03 Aug 06 (Deposition) - 17 Aug 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Protein Kinase, Phosphorylation, Nucleotide-Binding, Pak4, Ste20, Kinase, Transferase, Atp-Binding, Alternative Splicing, Serine/Threonine-Protein Kinase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. E. Debreczeni, J. Eswaran, E. Ugochukwu, E. Papagrigoriou, A. Turnbull, F. Von Delft, C. Arrowsmith, J. Weigelt, A. Edwards, M. Sundstrom, S. Knapp
Crystal Structure Of The Human P21-Activated Kinase 4
To Be Published
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Hetero Components
(2, 5)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
2a: PHOSPHOSERINE (SEPa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
4
Ligand/Ion
1,2-ETHANEDIOL
2
SEP
1
Mod. Amino Acid
PHOSPHOSERINE
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN A:323 , ILE A:325 , ILE A:337 , ALA A:338 , THR A:339 , PHE A:364 , HOH A:2054
BINDING SITE FOR RESIDUE EDO A1590
2
AC2
SOFTWARE
ILE A:327 , PHE A:397 , LEU A:398 , HOH A:2203 , HOH A:2204
BINDING SITE FOR RESIDUE EDO A1591
3
AC3
SOFTWARE
LYS A:350 , ASP A:440 , ASP A:458 , GLY A:460
BINDING SITE FOR RESIDUE EDO A1592
4
AC4
SOFTWARE
GLU A:366 , VAL A:379 , LEU A:456 , SER A:457 , PHE A:459
BINDING SITE FOR RESIDUE EDO A1593
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:327-351)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
PAK4_HUMAN
327-351
1
A:327-351
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Exons
(6, 6)
Info
All Exons
Exon 1.5 (A:300-366)
Exon 1.6 (A:367-411)
Exon 1.7 (A:411-453)
Exon 1.8 (A:454-495)
Exon 1.9 (A:496-540)
Exon 1.10 (A:541-589)
View:
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All Exon Boundaries
1: Boundary 1.4/1.5
2: Boundary 1.5/1.6
3: Boundary 1.6/1.7
4: Boundary 1.7/1.8
5: Boundary 1.8/1.9
6: Boundary 1.9/1.10
7: Boundary 1.10/-
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2
ENST00000360442
2
ENSE00001510615
chr19:
39659251-39659480
230
PAK4_HUMAN
-
0
0
-
-
1.3b
ENST00000360442
3b
ENSE00000882572
chr19:
39660172-39660397
226
PAK4_HUMAN
1-68
68
0
-
-
1.4
ENST00000360442
4
ENSE00001242921
chr19:
39663558-39664016
459
PAK4_HUMAN
69-221
153
0
-
-
1.5
ENST00000360442
5
ENSE00000882573
chr19:
39664216-39664650
435
PAK4_HUMAN
222-366
145
1
A:300-366
67
1.6
ENST00000360442
6
ENSE00001777324
chr19:
39665571-39665704
134
PAK4_HUMAN
367-411
45
1
A:367-411
45
1.7
ENST00000360442
7
ENSE00000882575
chr19:
39665952-39666078
127
PAK4_HUMAN
411-453
43
1
A:411-453
43
1.8
ENST00000360442
8
ENSE00000704690
chr19:
39667230-39667355
126
PAK4_HUMAN
454-495
42
1
A:454-495
42
1.9
ENST00000360442
9
ENSE00000882577
chr19:
39668315-39668449
135
PAK4_HUMAN
496-540
45
1
A:496-540
45
1.10
ENST00000360442
10
ENSE00001296813
chr19:
39669064-39670046
983
PAK4_HUMAN
541-591
51
1
A:541-589
49
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2j0ia_ (A:)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
automated matches
(529)
Protein domain
:
automated matches
(529)
Human (Homo sapiens) [TaxId: 9606]
(438)
1a
d2j0ia_
A:
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_2j0iA01 (A:300-397)
2a: CATH_2j0iA02 (A:398-589)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
Human (Homo sapiens)
(1036)
1a
2j0iA01
A:300-397
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
Human (Homo sapiens)
(1049)
2a
2j0iA02
A:398-589
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (108 KB)
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