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2IWP
Asym. Unit
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Asym.Unit (35 KB)
Biol.Unit 1 (29 KB)
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(1)
Title
:
12TH PDZ DOMAIN OF MULTIPLE PDZ DOMAIN PROTEIN MPDZ (CASP TARGET)
Authors
:
J. M. Elkins, X. Yang, C. Gileadi, G. Schoch, C. Johansson, P. Savitsky, G. Berridge, C. E. A. Smee, A. Turnbull, A. Pike, E. Papagrigoriou, M. S A. Edwards, C. Arrowsmith, J. Weigelt, D. A. Doyle
Date
:
03 Jul 06 (Deposition) - 26 Jul 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.15
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Sgc, Pdz, Mpdz, Mupp1, Mupp-1, Membrane, Pdz Domain, Host- Virus Interaction, Structural Genomics Consortium, Synaptosome, Tight Junction, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. M. Elkins, E. Papagrigoriou, G. Berridge, X. Yang, C. Phillips, C. Gileadi, P. Savitsky, D. A. Doyle
Structure Of Pick1 And Other Pdz Domains Obtained With The Help Of Self-Binding C-Terminal Extension.
Protein Sci. V. 16 683 2007
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: PDZ (-|-|-|-|-|-|-|-|-|-|-|A:1834-1920,...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PDZ
PS50106
PDZ domain profile.
MPDZ_HUMAN
137-224
257-337
377-463
553-634
700-776
1008-1076
1151-1239
1350-1433
1483-1564
1629-1712
1725-1807
1862-1948
1987-2070
2
-
-
-
-
-
-
-
-
-
-
-
A:1834-1920
B:1834-1920
-
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Exons
(5, 9)
Info
All Exons
Exon 1.41a (- | B:1822-1829)
Exon 1.42 (A:1832-1839 | B:1830-1839)
Exon 1.43 (A:1844-1880 | B:1840-1880)
Exon 1.44 (A:1881-1915 | B:1881-1915)
Exon 1.45 (A:1916-1927 (gaps) | B:1916-1927 (...)
View:
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All Exon Boundaries
1: Boundary 1.40b/1.41a
2: Boundary 1.41a/1.42
3: Boundary 1.42/1.43
4: Boundary 1.43/1.44
5: Boundary 1.44/1.45
6: Boundary 1.45/1.46
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1c
ENST00000319217
1c
ENSE00001934625
chr9:
13250328-13250299
30
MPDZ_HUMAN
1-6
6
0
-
-
1.2
ENST00000319217
2
ENSE00001678863
chr9:
13247800-13247634
167
MPDZ_HUMAN
6-61
56
0
-
-
1.3
ENST00000319217
3
ENSE00001621914
chr9:
13224582-13224373
210
MPDZ_HUMAN
62-131
70
0
-
-
1.4
ENST00000319217
4
ENSE00001664917
chr9:
13223709-13223570
140
MPDZ_HUMAN
132-178
47
0
-
-
1.5
ENST00000319217
5
ENSE00001741916
chr9:
13222445-13222232
214
MPDZ_HUMAN
178-249
72
0
-
-
1.6
ENST00000319217
6
ENSE00001619314
chr9:
13221499-13221371
129
MPDZ_HUMAN
250-292
43
0
-
-
1.7a
ENST00000319217
7a
ENSE00001641589
chr9:
13219767-13219558
210
MPDZ_HUMAN
293-362
70
0
-
-
1.8
ENST00000319217
8
ENSE00001654162
chr9:
13217293-13217179
115
MPDZ_HUMAN
363-401
39
0
-
-
1.9
ENST00000319217
9
ENSE00001687264
chr9:
13216861-13216773
89
MPDZ_HUMAN
401-430
30
0
-
-
1.10b
ENST00000319217
10b
ENSE00001776738
chr9:
13206098-13205915
184
MPDZ_HUMAN
431-492
62
0
-
-
1.11
ENST00000319217
11
ENSE00001644434
chr9:
13205106-13205035
72
MPDZ_HUMAN
492-516
25
0
-
-
1.12
ENST00000319217
12
ENSE00001761630
chr9:
13196229-13196120
110
MPDZ_HUMAN
516-552
37
0
-
-
1.13
ENST00000319217
13
ENSE00001718719
chr9:
13193312-13193166
147
MPDZ_HUMAN
553-601
49
0
-
-
1.14b
ENST00000319217
14b
ENSE00001731016
chr9:
13192294-13192130
165
MPDZ_HUMAN
602-656
55
0
-
-
1.15a
ENST00000319217
15a
ENSE00001775725
chr9:
13190298-13190113
186
MPDZ_HUMAN
657-718
62
0
-
-
1.16
ENST00000319217
16
ENSE00001656294
chr9:
13188992-13188783
210
MPDZ_HUMAN
719-788
70
0
-
-
1.17
ENST00000319217
17
ENSE00001741335
chr9:
13186385-13186269
117
MPDZ_HUMAN
789-827
39
0
-
-
1.18
ENST00000319217
18
ENSE00001672728
chr9:
13183584-13183417
168
MPDZ_HUMAN
828-883
56
0
-
-
1.19
ENST00000319217
19
ENSE00001774479
chr9:
13176416-13176135
282
MPDZ_HUMAN
884-977
94
0
-
-
1.20b
ENST00000319217
20b
ENSE00001717162
chr9:
13175874-13175751
124
MPDZ_HUMAN
978-1019
42
0
-
-
1.21
ENST00000319217
21
ENSE00001689243
chr9:
13168563-13168365
199
MPDZ_HUMAN
1019-1085
67
0
-
-
1.23
ENST00000319217
23
ENSE00001668414
chr9:
13162794-13162690
105
MPDZ_HUMAN
1085-1120
36
0
-
-
1.24
ENST00000319217
24
ENSE00001677349
chr9:
13158109-13158017
93
MPDZ_HUMAN
1120-1151
32
0
-
-
1.25
ENST00000319217
25
ENSE00001781999
chr9:
13150687-13150510
178
MPDZ_HUMAN
1151-1210
60
0
-
-
1.26
ENST00000319217
26
ENSE00001669588
chr9:
13147657-13147547
111
MPDZ_HUMAN
1211-1247
37
0
-
-
1.27
ENST00000319217
27
ENSE00000689662
chr9:
13143563-13143465
99
MPDZ_HUMAN
1248-1280
33
0
-
-
1.28
ENST00000319217
28
ENSE00001749448
chr9:
13140148-13139986
163
MPDZ_HUMAN
1281-1335
55
0
-
-
1.29
ENST00000319217
29
ENSE00001797744
chr9:
13138152-13137956
197
MPDZ_HUMAN
1335-1400
66
0
-
-
1.30
ENST00000319217
30
ENSE00001674971
chr9:
13136802-13136711
92
MPDZ_HUMAN
1401-1431
31
0
-
-
1.31a
ENST00000319217
31a
ENSE00001685780
chr9:
13136181-13136091
91
MPDZ_HUMAN
1431-1461
31
0
-
-
1.32b
ENST00000319217
32b
ENSE00001606347
chr9:
13133903-13133823
81
MPDZ_HUMAN
1462-1488
27
0
-
-
1.33
ENST00000319217
33
ENSE00001640400
chr9:
13126771-13126679
93
MPDZ_HUMAN
1489-1519
31
0
-
-
1.34
ENST00000319217
34
ENSE00001805659
chr9:
13126589-13126515
75
MPDZ_HUMAN
1520-1544
25
0
-
-
1.35
ENST00000319217
35
ENSE00001636204
chr9:
13125389-13125215
175
MPDZ_HUMAN
1545-1603
59
0
-
-
1.36
ENST00000319217
36
ENSE00001624161
chr9:
13123297-13123152
146
MPDZ_HUMAN
1603-1651
49
0
-
-
1.37
ENST00000319217
37
ENSE00001637999
chr9:
13122169-13122086
84
MPDZ_HUMAN
1652-1679
28
0
-
-
1.38
ENST00000319217
38
ENSE00001803493
chr9:
13121931-13121738
194
MPDZ_HUMAN
1680-1744
65
0
-
-
1.39b
ENST00000319217
39b
ENSE00001659240
chr9:
13119648-13119501
148
MPDZ_HUMAN
1744-1793
50
0
-
-
1.40b
ENST00000319217
40b
ENSE00001420090
chr9:
13115333-13115247
87
MPDZ_HUMAN
1794-1822
29
0
-
-
1.41a
ENST00000319217
41a
ENSE00001259421
chr9:
13114020-13113930
91
MPDZ_HUMAN
1823-1853
31
1
-
B:1822-1829
-
8
1.42
ENST00000319217
42
ENSE00000689630
chr9:
13113053-13113010
44
MPDZ_HUMAN
1853-1867
15
2
A:1832-1839
B:1830-1839
8
10
1.43
ENST00000319217
43
ENSE00000813304
chr9:
13112145-13112023
123
MPDZ_HUMAN
1868-1908
41
2
A:1844-1880
B:1840-1880
37
41
1.44
ENST00000319217
44
ENSE00000813303
chr9:
13110739-13110635
105
MPDZ_HUMAN
1909-1943
35
2
A:1881-1915
B:1881-1915
35
35
1.45
ENST00000319217
45
ENSE00000689624
chr9:
13110063-13109951
113
MPDZ_HUMAN
1944-1981
38
2
A:1916-1927 (gaps)
B:1916-1927 (gaps)
32
32
1.46
ENST00000319217
46
ENSE00000813301
chr9:
13109058-13108935
124
MPDZ_HUMAN
1981-2022
42
0
-
-
1.47e
ENST00000319217
47e
ENSE00001487238
chr9:
13107110-13105703
1408
MPDZ_HUMAN
2023-2070
48
0
-
-
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2iwpa_ (A:)
1b: SCOP_d2iwpb_ (B:)
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All beta proteins
(24004)
Fold
:
PDZ domain-like
(299)
Superfamily
:
PDZ domain-like
(299)
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:
automated matches
(94)
Protein domain
:
automated matches
(94)
Human (Homo sapiens) [TaxId: 9606]
(71)
1a
d2iwpa_
A:
1b
d2iwpb_
B:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_2iwpB00 (B:1822-1927)
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Mainly Beta
(13760)
Architecture
:
Roll
(1513)
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:
Pdz3 Domain
(191)
Homologous Superfamily
:
[code=2.30.42.10, no name defined]
(191)
Human (Homo sapiens)
(120)
1a
2iwpB00
B:1822-1927
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Pfam Domains
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