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2IVX
Asym. Unit
Info
Asym.Unit (95 KB)
Biol.Unit 1 (47 KB)
Biol.Unit 2 (46 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN CYCLIN T2 AT 1.8 A RESOLUTION (CASP TARGET)
Authors
:
J. E. Debreczeni, A. N. Bullock, O. Fedorov, P. Savitsky, G. Berridge, S A. C. W. Pike, A. Turnbull, E. Ugochukwu, E. Papagrigoriou, F. Gorrec, M. Sundstrom, A. Edwards, C. Arrowsmith, J. Weigelt, F. Von Delft, S.
Date
:
21 Jun 06 (Deposition) - 19 Jul 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Transcription Regulation, Cell Division, Phosphorylation, Nuclear Protein, Cyclin, Cell Cycle, Transcription
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Baumli, G. Lolli, E. D. Lowe, S. Troiani, L. Rusconi, A. N. Bullock, J. E. Debreczeni, S. Knapp, L. N. Johnson
The Structure Of P-Tefb (Cdk9/Cyclin T1), Its Complex With Flavopiridol And Regulation By Phosphorylation.
Embo J. V. 27 1907 2008
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Hetero Components
(1, 6)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
View:
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No.
Name
Count
Type
Full Name
1
EDO
6
Ligand/Ion
1,2-ETHANEDIOL
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:201 , CYS A:204 , TRP A:209 , ILE A:211 , TRP A:220 , HOH A:2155
BINDING SITE FOR RESIDUE EDO A1263
2
AC2
SOFTWARE
ARG A:67 , GLU A:150 , CYS A:187 , PRO A:192 , HOH A:2001 , HOH A:2103 , HOH A:2156
BINDING SITE FOR RESIDUE EDO A1264
3
AC3
SOFTWARE
PHE A:74 , THR A:75 , LYS A:76 , ASN A:78
BINDING SITE FOR RESIDUE EDO A1265
4
AC4
SOFTWARE
LYS A:32 , CYS A:36 , PHE A:74 , THR A:75
BINDING SITE FOR RESIDUE EDO A1266
5
AC5
SOFTWARE
HIS B:201 , CYS B:204 , TRP B:209 , ILE B:211 , TRP B:220 , HOH B:2171
BINDING SITE FOR RESIDUE EDO B1264
6
AC6
SOFTWARE
CYS B:36 , THR B:75
BINDING SITE FOR RESIDUE EDO B1265
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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;
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Exons
(9, 18)
Info
All Exons
Exon 1.1d (A:7-53 | B:9-53)
Exon 1.2a (A:53-80 | B:53-80)
Exon 1.3 (A:81-123 | B:81-123)
Exon 1.4 (A:124-144 | B:124-144)
Exon 1.5a (A:144-165 | B:144-165)
Exon 1.7a (A:165-180 | B:165-180)
Exon 1.8b (A:180-235 | B:180-235)
Exon 1.9a (A:235-258 | B:235-258)
Exon 1.10e (A:259-262 | B:259-263)
View:
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All Exon Boundaries
01: Boundary -/1.1d
02: Boundary 1.1d/1.2a
03: Boundary 1.2a/1.3
04: Boundary 1.3/1.4
05: Boundary 1.4/1.5a
06: Boundary 1.5a/1.7a
07: Boundary 1.7a/1.8b
08: Boundary 1.8b/1.9a
09: Boundary 1.9a/1.10e
10: Boundary 1.10e/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1d
ENST00000264157
1d
ENSE00001132542
chr2:
135676395-135676582
188
CCNT2_HUMAN
1-53
53
2
A:7-53
B:9-53
47
45
1.2a
ENST00000264157
2a
ENSE00000827071
chr2:
135677380-135677461
82
CCNT2_HUMAN
53-80
28
2
A:53-80
B:53-80
28
28
1.3
ENST00000264157
3
ENSE00001802057
chr2:
135694411-135694539
129
CCNT2_HUMAN
81-123
43
2
A:81-123
B:81-123
43
43
1.4
ENST00000264157
4
ENSE00001792175
chr2:
135696572-135696632
61
CCNT2_HUMAN
124-144
21
2
A:124-144
B:124-144
21
21
1.5a
ENST00000264157
5a
ENSE00000776509
chr2:
135700182-135700244
63
CCNT2_HUMAN
144-165
22
2
A:144-165
B:144-165
22
22
1.7a
ENST00000264157
7a
ENSE00001596018
chr2:
135703671-135703716
46
CCNT2_HUMAN
165-180
16
2
A:165-180
B:165-180
16
16
1.8b
ENST00000264157
8b
ENSE00001702605
chr2:
135705306-135705469
164
CCNT2_HUMAN
180-235
56
2
A:180-235
B:180-235
56
56
1.9a
ENST00000264157
9a
ENSE00001792349
chr2:
135710211-135710281
71
CCNT2_HUMAN
235-258
24
2
A:235-258
B:235-258
24
24
1.10e
ENST00000264157
10e
ENSE00001386482
chr2:
135710800-135716912
6113
CCNT2_HUMAN
259-730
472
2
A:259-262
B:259-263
4
5
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d2ivxa1 (A:7-149)
1b: SCOP_d2ivxa2 (A:150-262)
1c: SCOP_d2ivxb1 (B:9-149)
1d: SCOP_d2ivxb2 (B:150-263)
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Class
:
All alpha proteins
(14657)
Fold
:
Cyclin-like
(137)
Superfamily
:
Cyclin-like
(137)
Family
:
Cyclin
(117)
Protein domain
:
Cyclin-T2
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d2ivxa1
A:7-149
1b
d2ivxa2
A:150-262
1c
d2ivxb1
B:9-149
1d
d2ivxb2
B:150-263
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CATH Domains
(0, 0)
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Pfam Domains
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Asym.Unit (95 KB)
Header - Asym.Unit
Biol.Unit 1 (47 KB)
Header - Biol.Unit 1
Biol.Unit 2 (46 KB)
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