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2IV6
Asym. Unit
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Asym.Unit (133 KB)
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Models
(30 )
Title
:
HPRP-173-195-D178N SOLUTION STRUCTURE
Authors
:
G. Saviano, T. Tancredi
Date
:
08 Jun 06 (Deposition) - 28 Nov 06 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (30 x)
Keywords
:
Prion Protein, Human Prion Protein, Peptide, Solution Structure
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Ronga, P. Palladino, B. Tizzano, S. Costantini, A. Facchiano, G. Saviano, T. Tancredi, M. Ruvo, R. Ragone, E. Benedetti, F. Rossi
The Conformational Landscape Of The Human Prion Protein Alpha 2 Domain: Comparative Nmr And Md Studies On Helix-2-Derived Peptides
To Be Published
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(6, 6)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_006469 (N178N, chain A, )
2: VAR_006470 (V180I, chain A, )
3: VAR_006471 (T183A, chain A, )
4: VAR_008746 (H187R, chain A, )
5: VAR_008748 (T188K, chain A, )
6: VAR_008747 (T188R, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_006469
D
178
N
PRIO_HUMAN
Disease (FFI)
---
A
N
178
N
2
UniProt
VAR_006470
V
180
I
PRIO_HUMAN
Disease (CJD)
---
A
V
180
I
3
UniProt
VAR_006471
T
183
A
PRIO_HUMAN
Unclassified
---
A
T
183
A
4
UniProt
VAR_008746
H
187
R
PRIO_HUMAN
Disease (GSD)
---
A
H
187
R
5
UniProt
VAR_008748
T
188
K
PRIO_HUMAN
Unclassified
---
A
T
188
K
6
UniProt
VAR_008747
T
188
R
PRIO_HUMAN
Polymorphism
---
A
T
188
R
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
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Exons
(1, 1)
Info
All Exons
Exon 1.2e (A:173-195)
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All Exon Boundaries
1: Boundary 1.1c/1.2e
2: Boundary 1.2e/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1c
ENST00000379440
1c
ENSE00001957346
chr20:
4666882-4667158
277
PRIO_HUMAN
-
0
0
-
-
1.2e
ENST00000379440
2e
ENSE00001928116
chr20:
4679857-4682236
2380
PRIO_HUMAN
1-257
257
1
A:173-195
23
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SCOP Domains
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CATH Domains
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Pfam Domains
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Protein
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Chain A
Asymmetric Unit 1
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select chains 'A' and 'C'
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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select non-helix/non-sheet protein parts
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