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2IUB
Biol. Unit 2
Info
Asym.Unit (560 KB)
Biol.Unit 1 (274 KB)
Biol.Unit 2 (279 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A DIVALENT METAL ION TRANSPORTER CORA AT 2.9 A RESOLUTION.
Authors
:
S. Eshaghi, D. Niegowski, A. Kohl, D. Martinez Molina, S. A. Lesley, P. Nordlund
Date
:
01 Jun 06 (Deposition) - 03 Aug 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J
Biol. Unit 1: A,B,C,D,E (1x)
Biol. Unit 2: F,G,H,I,J (1x)
Keywords
:
Membrane Protein, Cora, Divalent Cation, Ion Transporter
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Eshaghi, D. Niegowski, A. Kohl, D. Martinez Molina, S. A. Lesley, P. Nordlund
Crystal Structure Of A Divalent Metal Ion Transporter Cora At 2. 9 Angstrom Resolution.
Science V. 313 354 2006
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Hetero Components
(0, 0)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
1g: CHLORIDE ION (CLg)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
2c: MAGNESIUM ION (MGc)
2d: MAGNESIUM ION (MGd)
2e: MAGNESIUM ION (MGe)
2f: MAGNESIUM ION (MGf)
2g: MAGNESIUM ION (MGg)
2h: MAGNESIUM ION (MGh)
2i: MAGNESIUM ION (MGi)
2j: MAGNESIUM ION (MGj)
2k: MAGNESIUM ION (MGk)
2l: MAGNESIUM ION (MGl)
2m: MAGNESIUM ION (MGm)
2n: MAGNESIUM ION (MGn)
2o: MAGNESIUM ION (MGo)
2p: MAGNESIUM ION (MGp)
2q: MAGNESIUM ION (MGq)
2r: MAGNESIUM ION (MGr)
2s: MAGNESIUM ION (MGs)
2t: MAGNESIUM ION (MGt)
2u: MAGNESIUM ION (MGu)
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Sites
(12, 12)
Info
All Sites
01: BC2 (SOFTWARE)
02: BC3 (SOFTWARE)
03: BC4 (SOFTWARE)
04: BC5 (SOFTWARE)
05: BC6 (SOFTWARE)
06: BC7 (SOFTWARE)
07: BC8 (SOFTWARE)
08: BC9 (SOFTWARE)
09: CC1 (SOFTWARE)
10: CC6 (SOFTWARE)
11: CC7 (SOFTWARE)
12: CC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
BC2
SOFTWARE
PRO F:14 , GLU F:88 , HOH I:2001 , HOH I:2002
BINDING SITE FOR RESIDUE MG F1350
02
BC3
SOFTWARE
LEU I:12
BINDING SITE FOR RESIDUE MG F1352
03
BC4
SOFTWARE
ASP F:89 , HOH F:2001 , ASP I:253
BINDING SITE FOR RESIDUE MG F1353
04
BC5
SOFTWARE
ASP G:253 , ASP H:89 , HOH H:2001
BINDING SITE FOR RESIDUE MG G1352
05
BC6
SOFTWARE
ASP F:253 , ASP G:89
BINDING SITE FOR RESIDUE MG G1353
06
BC7
SOFTWARE
ASP F:179
BINDING SITE FOR RESIDUE MG G1354
07
BC8
SOFTWARE
ASP I:89 , ASP J:253
BINDING SITE FOR RESIDUE MG J1350
08
BC9
SOFTWARE
ASP H:253 , ASP J:89
BINDING SITE FOR RESIDUE MG J1351
09
CC1
SOFTWARE
ASP H:175 , HOH H:2002
BINDING SITE FOR RESIDUE MG J1352
10
CC6
SOFTWARE
ILE G:160 , ILE G:161 , TYR G:168
BINDING SITE FOR RESIDUE CL G1350
11
CC7
SOFTWARE
PRO I:14 , ILE J:160 , TYR J:168
BINDING SITE FOR RESIDUE CL F1351
12
CC8
SOFTWARE
ILE H:160 , ILE H:161 , TYR H:168
BINDING SITE FOR RESIDUE CL G1351
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 20)
Info
All SCOP Domains
1a: SCOP_d2iuba1 (A:5-285)
1b: SCOP_d2iubb1 (B:5-285)
1c: SCOP_d2iubc1 (C:6-285)
1d: SCOP_d2iubd1 (D:5-285)
1e: SCOP_d2iube1 (E:5-285)
1f: SCOP_d2iubf1 (F:5-285)
1g: SCOP_d2iubg1 (G:5-285)
1h: SCOP_d2iubh1 (H:6-285)
1i: SCOP_d2iubi1 (I:7-285)
1j: SCOP_d2iubj1 (J:5-285)
2a: SCOP_d2iuba2 (A:286-349)
2b: SCOP_d2iubb2 (B:286-349)
2c: SCOP_d2iubc2 (C:286-349)
2d: SCOP_d2iubd2 (D:286-349)
2e: SCOP_d2iube2 (E:286-349)
2f: SCOP_d2iubf2 (F:286-349)
2g: SCOP_d2iubg2 (G:286-349)
2h: SCOP_d2iubh2 (H:286-349)
2i: SCOP_d2iubi2 (I:286-349)
2j: SCOP_d2iubj2 (J:286-349)
View:
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
CorA soluble domain-like
(5)
Superfamily
:
CorA soluble domain-like
(5)
Family
:
CorA soluble domain-like
(5)
Protein domain
:
automated matches
(2)
Thermotoga maritima [TaxId: 2336]
(1)
1a
d2iuba1
A:5-285
1b
d2iubb1
B:5-285
1c
d2iubc1
C:6-285
1d
d2iubd1
D:5-285
1e
d2iube1
E:5-285
1f
d2iubf1
F:5-285
1g
d2iubg1
G:5-285
1h
d2iubh1
H:6-285
1i
d2iubi1
I:7-285
1j
d2iubj1
J:5-285
Class
:
Membrane and cell surface proteins and peptides
(2046)
Fold
:
Transmembrane helix hairpin
(84)
Superfamily
:
Magnesium transport protein CorA, transmembrane region
(4)
Family
:
Magnesium transport protein CorA, transmembrane region
(4)
Protein domain
:
Magnesium transport protein CorA
(4)
Thermotoga maritima [TaxId: 2336]
(3)
2a
d2iuba2
A:286-349
2b
d2iubb2
B:286-349
2c
d2iubc2
C:286-349
2d
d2iubd2
D:286-349
2e
d2iube2
E:286-349
2f
d2iubf2
F:286-349
2g
d2iubg2
G:286-349
2h
d2iubh2
H:286-349
2i
d2iubi2
I:286-349
2j
d2iubj2
J:286-349
[
close SCOP info
]
CATH Domains
(2, 30)
Info
all CATH domains
1a: CATH_2iubI01 (I:7-155)
1b: CATH_2iubJ01 (J:5-155)
1c: CATH_2iubC01 (C:6-155)
1d: CATH_2iubH01 (H:6-155)
1e: CATH_2iubA01 (A:5-155)
1f: CATH_2iubB01 (B:5-155)
1g: CATH_2iubD01 (D:5-155)
1h: CATH_2iubE01 (E:5-155)
1i: CATH_2iubF01 (F:5-155)
1j: CATH_2iubG01 (G:5-155)
2a: CATH_2iubF03 (F:274-349)
2b: CATH_2iubG03 (G:274-349)
2c: CATH_2iubA02 (A:156-273)
2d: CATH_2iubB02 (B:156-273)
2e: CATH_2iubC02 (C:156-273)
2f: CATH_2iubD02 (D:156-273)
2g: CATH_2iubE02 (E:156-273)
2h: CATH_2iubI03 (I:274-349)
2i: CATH_2iubF02 (F:156-273)
2j: CATH_2iubG02 (G:156-273)
2k: CATH_2iubH02 (H:156-273)
2l: CATH_2iubI02 (I:156-273)
2m: CATH_2iubJ02 (J:156-273)
2n: CATH_2iubH03 (H:274-349)
2o: CATH_2iubJ03 (J:274-349)
2p: CATH_2iubC03 (C:274-349)
2q: CATH_2iubA03 (A:274-349)
2r: CATH_2iubB03 (B:274-349)
2s: CATH_2iubD03 (D:274-349)
2t: CATH_2iubE03 (E:274-349)
View:
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Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Beta Polymerase; domain 2
(187)
Homologous Superfamily
:
CorA soluble domain-like
(4)
Thermotoga maritima. Organism_taxid: 2336.
(3)
1a
2iubI01
I:7-155
1b
2iubJ01
J:5-155
1c
2iubC01
C:6-155
1d
2iubH01
H:6-155
1e
2iubA01
A:5-155
1f
2iubB01
B:5-155
1g
2iubD01
D:5-155
1h
2iubE01
E:5-155
1i
2iubF01
F:5-155
1j
2iubG01
G:5-155
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Methane Monooxygenase Hydroxylase; Chain G, domain 1
(192)
Homologous Superfamily
:
Magnesium transport protein CorA, transmembrane region
(3)
Thermotoga maritima. Organism_taxid: 2336.
(2)
2a
2iubF03
F:274-349
2b
2iubG03
G:274-349
2c
2iubA02
A:156-273
2d
2iubB02
B:156-273
2e
2iubC02
C:156-273
2f
2iubD02
D:156-273
2g
2iubE02
E:156-273
2h
2iubI03
I:274-349
2i
2iubF02
F:156-273
2j
2iubG02
G:156-273
2k
2iubH02
H:156-273
2l
2iubI02
I:156-273
2m
2iubJ02
J:156-273
2n
2iubH03
H:274-349
2o
2iubJ03
J:274-349
2p
2iubC03
C:274-349
2q
2iubA03
A:274-349
2r
2iubB03
B:274-349
2s
2iubD03
D:274-349
2t
2iubE03
E:274-349
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Asym.Unit (560 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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