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2IJM
Asym. Unit
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Asym.Unit (94 KB)
Biol.Unit 1 (46 KB)
Biol.Unit 2 (47 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF FOCAL ADHESION KINASE DOMAIN WITH 2 MOLECULES IN THE ASYMMETRIC UNIT COMPLEXED WITH ADP AND ATP
Authors
:
C. C. Lee
Date
:
29 Sep 06 (Deposition) - 14 Aug 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.19
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Kinase Catalytic Domain, Signaling Protein, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. B. Andersen, K. Ng, S. Ficarro, C. Vu, H-S. Choi, Y. He, G. Spraggon, N. Gray, C. C. Lee
Crystal Structure Of Focal Adhesion Kinase Catalytic Domain Complexed With Atp And Novel 7H-Pyrrolo [2, 3-D] Pyrimidine Inhibitor Scaffolds
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
2a: ADENOSINE-5'-TRIPHOSPHATE (ATPa)
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No.
Name
Count
Type
Full Name
1
ADP
1
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
ATP
1
Ligand/Ion
ADENOSINE-5'-TRIPHOSPHATE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH B:11 , HOH B:31 , ILE B:428 , GLY B:429 , GLU B:430 , GLY B:431 , GLN B:432 , VAL B:436 , ALA B:452 , LYS B:454 , MET B:499 , GLU B:500 , LEU B:501 , CYS B:502 , GLU B:506 , LEU B:553 , ASP B:564
BINDING SITE FOR RESIDUE ADP B 800
2
AC2
SOFTWARE
HOH A:210 , ILE A:428 , GLY A:429 , GLU A:430 , GLY A:431 , GLN A:432 , VAL A:436 , ALA A:452 , LYS A:454 , GLU A:471 , MET A:499 , GLU A:500 , LEU A:501 , CYS A:502 , GLU A:506 , ARG A:550 , ASN A:551 , LEU A:553 , ASP A:564 , PHE A:565 , LEU A:567
BINDING SITE FOR RESIDUE ATP A 690
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(3, 6)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:428-454,B:428-454)
2: PROTEIN_KINASE_TYR (A:542-554,B:542-554)
3: FERM_2 (A:544-568,B:544-568)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
FAK1_HUMAN
428-454
2
A:428-454
B:428-454
2
PROTEIN_KINASE_TYR
PS00109
Tyrosine protein kinases specific active-site signature.
FAK1_HUMAN
542-554
2
A:542-554
B:542-554
3
FERM_2
PS00661
FERM domain signature 2.
FAK1_HUMAN
544-574
2
A:544-568
B:544-568
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Exons
(0, 0)
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SCOP Domains
(1, 2)
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All SCOP Domains
1a: SCOP_d2ijma_ (A:)
1b: SCOP_d2ijmb_ (B:)
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(
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(
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
Focal adhesion kinase 1 (fak)
(16)
Human (Homo sapiens) [TaxId: 9606]
(14)
1a
d2ijma_
A:
1b
d2ijmb_
B:
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_2ijmA01 (A:414-501)
1b: CATH_2ijmB01 (B:414-501)
2a: CATH_2ijmA02 (A:502-684)
2b: CATH_2ijmB02 (B:502-684)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
Human (Homo sapiens)
(1036)
1a
2ijmA01
A:414-501
1b
2ijmB01
B:414-501
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
Human (Homo sapiens)
(1049)
2a
2ijmA02
A:502-684
2b
2ijmB02
B:502-684
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Pfam Domains
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Asym.Unit (94 KB)
Header - Asym.Unit
Biol.Unit 1 (46 KB)
Header - Biol.Unit 1
Biol.Unit 2 (47 KB)
Header - Biol.Unit 2
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