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2IGN
Biol. Unit 1
Info
Asym.Unit (850 KB)
Biol.Unit 1 (426 KB)
Biol.Unit 2 (423 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF RECOMBINANT PYRANOSE 2-OXIDASE H167A MUTANT
Authors
:
C. Divne
Date
:
22 Sep 06 (Deposition) - 10 Oct 06 (Release) - 12 Nov 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.65
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F,G,H (1x)
Keywords
:
Oxidoreductase, Gmc Oxidoreductase, H167A Mutant, Rossmann Fold, Phbh Fold, Homotetramer, 8-Alpha-(N3) Histidyl Flavinylation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Kujawa, H. Ebner, C. Leitner, B. M. Hallberg, M. Prongjit, J. Sucharitakul, R. Ludwig, U. Rudsander, C. Peterbauer, P. Chaiyen, D. Haltrich, C. Divne
Structural Basis For Substrate Binding And Regioselective Oxidation Of Monosaccharides At C3 By Pyranose 2-Oxidase.
J. Biol. Chem. V. 281 35104 2006
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Hetero Components
(2, 8)
Info
All Hetero Components
1a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
1b: FLAVIN-ADENINE DINUCLEOTIDE (FADb)
1c: FLAVIN-ADENINE DINUCLEOTIDE (FADc)
1d: FLAVIN-ADENINE DINUCLEOTIDE (FADd)
1e: FLAVIN-ADENINE DINUCLEOTIDE (FADe)
1f: FLAVIN-ADENINE DINUCLEOTIDE (FADf)
1g: FLAVIN-ADENINE DINUCLEOTIDE (FADg)
1h: FLAVIN-ADENINE DINUCLEOTIDE (FADh)
2a: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESa)
2b: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESb)
2c: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESc)
2d: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESd)
2e: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESe)
2f: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESf)
2g: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESg)
2h: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
FAD
4
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
2
MES
4
Ligand/Ion
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
[
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: BC1 (SOFTWARE)
6: BC2 (SOFTWARE)
7: BC4 (SOFTWARE)
8: BC7 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
VAL A:52 , GLY A:53 , GLY A:55 , PRO A:56 , ILE A:57 , ASP A:76 , ILE A:77 , THR A:158 , ARG A:159 , VAL A:160 , GLY A:163 , MET A:164 , ALA A:167 , TRP A:168 , THR A:169 , CYS A:170 , ALA A:171 , VAL A:281 , CYS A:283 , THR A:319 , ALA A:320 , HIS A:324 , LEU A:547 , ASN A:593 , THR A:595 , HOH A:8006 , HOH A:8007 , HOH A:8012 , HOH A:8018 , HOH A:8037 , HOH A:8050 , HOH A:8064 , HOH A:8077 , HOH A:8088 , HOH A:8107 , HOH A:8347
BINDING SITE FOR RESIDUE FAD A 7001
2
AC2
SOFTWARE
VAL B:52 , GLY B:53 , GLY B:55 , PRO B:56 , ILE B:57 , ASP B:76 , ILE B:77 , THR B:158 , ARG B:159 , VAL B:160 , GLY B:163 , MET B:164 , TRP B:168 , THR B:169 , CYS B:170 , ALA B:171 , VAL B:281 , CYS B:283 , THR B:319 , ALA B:320 , HIS B:324 , LEU B:547 , ASN B:593 , THR B:595 , HOH B:8007 , HOH B:8012 , HOH B:8035 , HOH B:8037 , HOH B:8061 , HOH B:8071 , HOH B:8076 , HOH B:8093 , HOH B:8141 , HOH B:8206 , HOH B:8639
BINDING SITE FOR RESIDUE FAD B 7002
3
AC3
SOFTWARE
VAL D:52 , GLY D:53 , GLY D:55 , PRO D:56 , ILE D:57 , ASP D:76 , ILE D:77 , THR D:158 , ARG D:159 , VAL D:160 , GLY D:163 , MET D:164 , ALA D:167 , TRP D:168 , THR D:169 , CYS D:170 , ALA D:171 , VAL D:281 , CYS D:283 , THR D:319 , ALA D:320 , HIS D:324 , LEU D:547 , ASN D:593 , THR D:595 , HOH D:8012 , HOH D:8017 , HOH D:8030 , HOH D:8074 , HOH D:8102 , HOH D:8103 , HOH D:8107 , HOH D:8111 , HOH D:8124 , HOH D:8150
BINDING SITE FOR RESIDUE FAD D 7003
4
AC4
SOFTWARE
VAL C:52 , GLY C:53 , GLY C:55 , PRO C:56 , ILE C:57 , ASP C:76 , ILE C:77 , THR C:158 , ARG C:159 , VAL C:160 , GLY C:163 , MET C:164 , ALA C:167 , TRP C:168 , THR C:169 , CYS C:170 , ALA C:171 , VAL C:281 , CYS C:283 , THR C:319 , ALA C:320 , HIS C:324 , LEU C:547 , ASN C:593 , THR C:595 , HOH C:8024 , HOH C:8025 , HOH C:8036 , HOH C:8046 , HOH C:8066 , HOH C:8069 , HOH C:8106 , HOH C:8117 , HOH C:8119 , HOH C:8176 , HOH C:8210
BINDING SITE FOR RESIDUE FAD C 7004
5
BC1
SOFTWARE
LEU A:121 , VAL A:122 , VAL A:123 , TRP A:131 , GLN A:132 , ALA A:133 , PHE A:137 , ARG A:139 , HOH A:8414 , HOH A:8633 , SER B:462 , ILE B:463 , ASP B:464 , LEU D:149
BINDING SITE FOR RESIDUE MES A 8002
6
BC2
SOFTWARE
SER A:462 , ILE A:463 , ASP A:464 , LEU B:121 , VAL B:122 , VAL B:123 , TRP B:131 , GLN B:132 , ALA B:133 , PHE B:137 , ARG B:139 , HOH B:8503 , HOH B:8607 , LEU C:149
BINDING SITE FOR RESIDUE MES B 8003
7
BC4
SOFTWARE
LEU A:149 , SER C:462 , ILE C:463 , ASP C:464 , LEU D:121 , VAL D:122 , VAL D:123 , TRP D:131 , GLN D:132 , ALA D:133 , PHE D:137 , ARG D:139 , HOH D:8310
BINDING SITE FOR RESIDUE MES D 8005
8
BC7
SOFTWARE
LEU B:149 , LEU C:121 , VAL C:122 , VAL C:123 , TRP C:131 , GLN C:132 , ALA C:133 , PHE C:137 , ARG C:139 , HOH C:8251 , SER D:462 , ILE D:463 , ASP D:464 , HOH D:8439
BINDING SITE FOR RESIDUE MES C 8008
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 16)
Info
All SCOP Domains
1a: SCOP_d2igna2 (A:355-552)
1b: SCOP_d2ignb2 (B:355-552)
1c: SCOP_d2ignc2 (C:355-552)
1d: SCOP_d2ignd2 (D:355-552)
1e: SCOP_d2igne2 (E:355-552)
1f: SCOP_d2ignf2 (F:355-552)
1g: SCOP_d2igng2 (G:355-552)
1h: SCOP_d2ignh2 (H:355-552)
2a: SCOP_d2igna1 (A:43-354,A:553-619)
2b: SCOP_d2ignb1 (B:43-354,B:553-619)
2c: SCOP_d2ignc1 (C:43-354,C:553-619)
2d: SCOP_d2ignd1 (D:43-354,D:553-619)
2e: SCOP_d2igne1 (E:43-354,E:553-619)
2f: SCOP_d2ignf1 (F:43-354,F:553-619)
2g: SCOP_d2igng1 (G:43-354,G:553-619)
2h: SCOP_d2ignh1 (H:43-354,H:553-619)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
FAD-linked reductases, C-terminal domain
(181)
Superfamily
:
FAD-linked reductases, C-terminal domain
(181)
Family
:
GMC oxidoreductases
(30)
Protein domain
:
Pyranose 2-oxidase
(5)
White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
(5)
1a
d2igna2
A:355-552
1b
d2ignb2
B:355-552
1c
d2ignc2
C:355-552
1d
d2ignd2
D:355-552
1e
d2igne2
E:355-552
1f
d2ignf2
F:355-552
1g
d2igng2
G:355-552
1h
d2ignh2
H:355-552
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
FAD/NAD(P)-binding domain
(331)
Superfamily
:
FAD/NAD(P)-binding domain
(331)
Family
:
FAD-linked reductases, N-terminal domain
(156)
Protein domain
:
Pyranose 2-oxidase
(5)
White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
(5)
2a
d2igna1
A:43-354,A:553-619
2b
d2ignb1
B:43-354,B:553-619
2c
d2ignc1
C:43-354,C:553-619
2d
d2ignd1
D:43-354,D:553-619
2e
d2igne1
E:43-354,E:553-619
2f
d2ignf1
F:43-354,F:553-619
2g
d2igng1
G:43-354,G:553-619
2h
d2ignh1
H:43-354,H:553-619
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CATH Domains
(0, 0)
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Pfam Domains
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