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2IEH
Biol. Unit 2
Info
Asym.Unit (122 KB)
Biol.Unit 1 (60 KB)
Biol.Unit 2 (60 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN KINESIN EG5 IN COMPLEX WITH (R)-MON97, A NEW MONASTROL-BASED INHIBITOR THAT BINDS AS (R)-ENANTIOMER
Authors
:
I. Garcia-Saez, F. Kozielski
Date
:
19 Sep 06 (Deposition) - 23 Jan 07 (Release) - 13 May 08 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Beta-Sheet Core, Flanked By Three Alpha-Helices On Each Side, Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
I. Garcia-Saez, S. Debonis, R. Lopez, F. Trucco, B. Rousseau, P. Thuery, F. Kozielski
Structure Of Human Eg5 In Complex With A New Monastrol-Based Inhibitor Bound In The R Configuration.
J. Biol. Chem. V. 282 9740 2007
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
1b: ADENOSINE-5'-DIPHOSPHATE (ADPb)
2a: CHLORIDE ION (CLa)
3a: POTASSIUM ION (Ka)
4a: MAGNESIUM ION (MGa)
4b: MAGNESIUM ION (MGb)
5a: [(4R)-4-(3-HYDROXYPHENYL)-1,6-DIME... (MOYa)
5b: [(4R)-4-(3-HYDROXYPHENYL)-1,6-DIME... (MOYb)
6a: TETRAETHYLENE GLYCOL (PG4a)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ADP
1
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
CL
-1
Ligand/Ion
CHLORIDE ION
3
K
-1
Ligand/Ion
POTASSIUM ION
4
MG
-1
Ligand/Ion
MAGNESIUM ION
5
MOY
1
Ligand/Ion
[(4R)-4-(3-HYDROXYPHENYL)-1,6-DIMETHYL-2-THIOXO-1,2,3,4-TETRAHYDROPYRIMIDIN-5-YL](PHENYL)METHANONE
6
PG4
-1
Ligand/Ion
TETRAETHYLENE GLYCOL
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Sites
(3, 3)
Info
All Sites
1: AC4 (SOFTWARE)
2: AC8 (SOFTWARE)
3: AC9 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC4
SOFTWARE
THR B:112 , ADP B:603 , HOH B:609 , HOH B:610 , HOH B:612
BINDING SITE FOR RESIDUE MG B 604
2
AC8
SOFTWARE
ARG B:24 , ARG B:26 , PRO B:27 , GLN B:106 , THR B:107 , GLY B:108 , THR B:109 , GLY B:110 , LYS B:111 , THR B:112 , PHE B:113 , GLU B:118 , MG B:604 , HOH B:610 , HOH B:619 , HOH B:625 , HOH B:702
BINDING SITE FOR RESIDUE ADP B 603
3
AC9
SOFTWARE
GLU B:116 , GLY B:117 , GLU B:118 , ARG B:119 , ASP B:130 , ALA B:133 , PRO B:137 , TYR B:211 , LEU B:214 , ARG B:221
BINDING SITE FOR RESIDUE MOY B 605
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SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_067829 (F144L, chain B, )
2: VAR_067830 (R234C, chain B, )
3: VAR_067831 (S235C, chain B, )
View:
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_067829
F
144
L
KIF11_HUMAN
Disease (MCLMR)
---
B
F
144
L
2
UniProt
VAR_067830
R
234
C
KIF11_HUMAN
Disease (MCLMR)
---
B
R
234
C
3
UniProt
VAR_067831
S
235
C
KIF11_HUMAN
Disease (MCLMR)
---
B
S
235
C
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: KINESIN_MOTOR_2 (B:18-359)
2: KINESIN_MOTOR_1 (B:259-270)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
KINESIN_MOTOR_2
PS50067
Kinesin motor domain profile.
KIF11_HUMAN
18-359
1
-
B:18-359
2
KINESIN_MOTOR_1
PS00411
Kinesin motor domain signature.
KIF11_HUMAN
259-270
1
-
B:259-270
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2ieha_ (A:)
1b: SCOP_d2iehb_ (B:)
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Protein Domains
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)
(
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Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
Motor proteins
(119)
Protein domain
:
automated matches
(40)
Human (Homo sapiens) [TaxId: 9606]
(31)
1a
d2ieha_
A:
1b
d2iehb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2iehA00 (A:15-364)
1b: CATH_2iehB00 (B:16-366)
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Organisms
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(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Kinesin
(69)
Homologous Superfamily
:
Kinesin
(69)
Human (Homo sapiens)
(36)
1a
2iehA00
A:15-364
1b
2iehB00
B:16-366
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Pfam Domains
(0, 0)
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all PFAM domains
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Chain B
Asymmetric Unit 1
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Asym.Unit (122 KB)
Header - Asym.Unit
Biol.Unit 1 (60 KB)
Header - Biol.Unit 1
Biol.Unit 2 (60 KB)
Header - Biol.Unit 2
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