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2IE6
Biol. Unit 1
Info
Asym.Unit (61 KB)
Biol.Unit 1 (162 KB)
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(1)
Title
:
ANNEXIN V UNDER 2.0 MPA PRESSURE OF XENON
Authors
:
N. Colloc'H, J. Sopkova-De Oliveira Santos, T. Prange, A. Brisson, B. Langlois D'Estainto, B. Gallois
Date
:
18 Sep 06 (Deposition) - 06 Feb 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.83
Chains
:
Asym. Unit : A
Biol. Unit 1: A (3x)
Keywords
:
Calcium Binding Protein, Phospholipid Binding Protein, Membrane Binding Protein, Protein And Metal Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. Colloc'H, J. Sopkova-De Oliveira Santos, P. Retailleau, B. Langlois D'Estainto, B. Gallois, A. Brisson, J. J. Risso, M. Lemaire, J. H. Abraini
Protein Crystallography Under Xenon And Nitrous Oxide Pressure: Comparison With In Vivo Pharmacology Studies And Implications For The Mechanism Of Inhaled Anesthetic Action
Biophys. J. V. 92 217 2007
(for further references see the
PDB file header
)
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Hetero Components
(1, 12)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
1f: CALCIUM ION (CAf)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
2d: SULFATE ION (SO4d)
3a: XENON (XEa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
-1
Ligand/Ion
CALCIUM ION
2
SO4
12
Ligand/Ion
SULFATE ION
3
XE
-1
Ligand/Ion
XENON
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:181 , LYS A:184 , GLY A:186 , GLU A:226 , SO4 A:420 , HOH A:559
BINDING SITE FOR RESIDUE CA A 401
02
AC2
SOFTWARE
MET A:26 , GLY A:28 , GLY A:30 , GLU A:70 , HOH A:594
BINDING SITE FOR RESIDUE CA A 402
03
AC3
SOFTWARE
ASP A:224 , THR A:227 , GLU A:232
BINDING SITE FOR RESIDUE CA A 403
04
AC4
SOFTWARE
MET A:257 , GLY A:259 , GLY A:261 , ASP A:301
BINDING SITE FOR RESIDUE CA A 404
05
AC5
SOFTWARE
LYS A:68 , LEU A:71
BINDING SITE FOR RESIDUE CA A 405
06
AC6
SOFTWARE
THR A:31 , GLU A:33
BINDING SITE FOR RESIDUE CA A 407
07
AC7
SOFTWARE
GLN A:179 , LYS A:184 , TRP A:185 , GLY A:186 , GLU A:226 , CA A:401 , HOH A:559 , HOH A:593
BINDING SITE FOR RESIDUE SO4 A 420
08
AC8
SOFTWARE
ARG A:23 , GLY A:28 , HOH A:568
BINDING SITE FOR RESIDUE SO4 A 421
09
AC9
SOFTWARE
SER A:303 , GLY A:304 , LYS A:307
BINDING SITE FOR RESIDUE SO4 A 422
10
BC1
SOFTWARE
ALA A:113 , ARG A:115 , SER A:241 , ILE A:242 , ILE A:245 , HOH A:539
BINDING SITE FOR RESIDUE SO4 A 423
11
BC2
SOFTWARE
PHE A:192 , THR A:227
BINDING SITE FOR RESIDUE XE A 450
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 12)
Info
All PROSITE Patterns/Profiles
1: ANNEXIN (A:261-313)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ANNEXIN
PS00223
Annexins repeated domain signature.
ANXA5_RAT
30-82
102-154
186-238
261-313
12
A:30-82
A:102-154
A:186-238
A:261-313
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Exons
(0, 0)
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All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2ie6a_ (A:)
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Classes
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)
(
)
Folds
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)
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)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Annexin
(61)
Superfamily
:
Annexin
(61)
Family
:
Annexin
(56)
Protein domain
:
Annexin V
(31)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(18)
1a
d2ie6a_
A:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_2ie6A02 (A:85-158)
1b: CATH_2ie6A01 (A:12-84)
1c: CATH_2ie6A04 (A:245-316)
1d: CATH_2ie6A03 (A:159-244)
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)
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Topologies
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)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Annexin V; domain 1
(80)
Homologous Superfamily
:
[code=1.10.220.10, no name defined]
(58)
Norway rat (Rattus norvegicus)
(18)
1a
2ie6A02
A:85-158
1b
2ie6A01
A:12-84
1c
2ie6A04
A:245-316
1d
2ie6A03
A:159-244
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Pfam Domains
(0, 0)
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all PFAM domains
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Asym.Unit (61 KB)
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