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Asym. Unit
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Asym.Unit (134 KB)
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Models
(15 )
Title
:
SOLUTION STRUCTURE OF THE UBIQUITIN-BINDING ZINC FINGER (UBZ) DOMAIN OF THE HUMAN DNA Y-POLYMERASE ETA
Authors
:
P. Zhou, M. G. Bomar
Date
:
25 Aug 06 (Deposition) - 13 Mar 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (15 x)
Keywords
:
Zinc Finger, Dna Polymerase, Pol Eta, Ubz, Ubiquitin-Binding Zinc Finger, Translesion Synthesis, Ubiquitin-Binding Domain, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. G. Bomar, M. T. Pai, S. R. Tzeng, S. S. Li, P. Zhou
Structure Of The Ubiquitin-Binding Zinc Finger Domain Of Human Dna Y-Polymerase Eta.
Embo Rep. V. 8 247 2007
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
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All Hetero Components
1a: ZINC ION (ZNa)
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Label:
No.
Name
Count
Type
Full Name
1
ZN
1
Ligand/Ion
ZINC ION
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Sites
(1, 1)
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All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:12 , CYS A:15 , HIS A:27 , HIS A:31
BINDING SITE FOR RESIDUE ZN A 336
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_021238 (M24L, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_021238
M
647
L
POLH_HUMAN
Polymorphism
6941583
A
M
24
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(1, 1)
Info
All Exons
Exon 1.11a (A:6-39)
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All Exon Boundaries
1: Boundary 1.10/1.11a
2: Boundary 1.11a/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000372236
1a
ENSE00001717994
chr6:
43543887-43544177
291
POLH_HUMAN
-
0
0
-
-
1.2
ENST00000372236
2
ENSE00001457304
chr6:
43550053-43550193
141
POLH_HUMAN
1-46
46
0
-
-
1.3
ENST00000372236
3
ENSE00002161294
chr6:
43550744-43550878
135
POLH_HUMAN
46-91
46
0
-
-
1.4b
ENST00000372236
4b
ENSE00000752927
chr6:
43555009-43555226
218
POLH_HUMAN
91-164
74
0
-
-
1.5
ENST00000372236
5
ENSE00000481500
chr6:
43565433-43565602
170
POLH_HUMAN
164-220
57
0
-
-
1.6
ENST00000372236
6
ENSE00001172213
chr6:
43568725-43568828
104
POLH_HUMAN
221-255
35
0
-
-
1.7
ENST00000372236
7
ENSE00001172207
chr6:
43571629-43571748
120
POLH_HUMAN
255-295
41
0
-
-
1.8
ENST00000372236
8
ENSE00001172201
chr6:
43572352-43572475
124
POLH_HUMAN
295-336
42
0
-
-
1.9
ENST00000372236
9
ENSE00001172195
chr6:
43572991-43573056
66
POLH_HUMAN
337-358
22
0
-
-
1.10
ENST00000372236
10
ENSE00001172191
chr6:
43578291-43578460
170
POLH_HUMAN
359-415
57
0
-
-
1.11a
ENST00000372236
11a
ENSE00001861041
chr6:
43581397-43583397
2001
POLH_HUMAN
415-713
299
1
A:6-39
34
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SCOP Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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