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2I3H
Biol. Unit 6
Info
Asym.Unit (80 KB)
Biol.Unit 1 (36 KB)
Biol.Unit 2 (39 KB)
Biol.Unit 3 (141 KB)
Biol.Unit 4 (72 KB)
Biol.Unit 5 (138 KB)
Biol.Unit 6 (138 KB)
Biol.Unit 7 (71 KB)
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(1)
Title
:
STRUCTURE OF AN ML-IAP/XIAP CHIMERA BOUND TO A 4-MER PEPTIDE (AVPW)
Authors
:
W. J. Fairbrother, M. C. Franklin
Date
:
18 Aug 06 (Deposition) - 19 Sep 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.62
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Biol. Unit 3: A,B,C,D (2x)
Biol. Unit 4: A,B,C,D (1x)
Biol. Unit 5: A,B,D (2x)
Biol. Unit 6: A,B,C (2x)
Biol. Unit 7: A,B,C (1x)
Keywords
:
Zinc Binding, Peptide Complex, Apoptosis Inhibition, Peptidomimetic, Small Molecule, Drug Design, Inhibitor/Apoptosis Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Zobel, L. Wang, E. Varfolomeev, M. C. Franklin, L. O. Elliott, H. J. Wallweber, D. C. Okawa, J. A. Flygare, D. Vucic, W. J. Fairbrother, K. Deshayes
Design, Synthesis, And Biological Activity Of A Potent Smac Mimetic That Sensitizes Cancer Cells To Apoptosis By Antagonizing Iaps.
Acs Chem. Biol. V. 1 525 2006
(for further references see the
PDB file header
)
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Hetero Components
(2, 6)
Info
All Hetero Components
1a: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-... (BTBa)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
3a: LITHIUM ION (LIa)
4a: ZINC ION (ZNa)
4b: ZINC ION (ZNb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
BTB
2
Ligand/Ion
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
2
EDO
4
Ligand/Ion
1,2-ETHANEDIOL
3
LI
-1
Ligand/Ion
LITHIUM ION
4
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:124 , CYS A:127 , HIS A:144 , CYS A:151
BINDING SITE FOR RESIDUE ZN A 1001
2
AC2
SOFTWARE
CYS B:124 , CYS B:127 , HIS B:144 , CYS B:151
BINDING SITE FOR RESIDUE ZN B 1001
3
AC3
SOFTWARE
SER B:93 , ASP B:96 , HIS B:115 , EDO B:301
BINDING SITE FOR RESIDUE LI B 1002
4
AC4
SOFTWARE
HOH A:1060 , PRO B:82 , LYS B:146 , TRP B:147 , HIS B:170 , HOH B:1011 , HOH B:1033 , HOH B:1086 , HOH B:1098
BINDING SITE FOR RESIDUE BTB B 401
5
AC5
SOFTWARE
SER A:93 , HOH A:1073 , SER B:93 , ASP B:96 , HIS B:115 , GLY B:117 , LI B:1002 , HOH B:1018 , HOH B:1101
BINDING SITE FOR RESIDUE EDO B 301
6
AC6
SOFTWARE
CYS B:127 , PHE B:148 , PRO B:149 , GLY B:150 , HOH B:1077
BINDING SITE FOR RESIDUE EDO B 302
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 8)
Info
All PROSITE Patterns/Profiles
1: BIR_REPEAT_1 (A:87-154,B:87-154)
2: BIR_REPEAT_2 (A:90-155,B:90-155)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
BIR_REPEAT_1
PS01282
BIR repeat.
BIRC7_HUMAN
87-154
4
A:87-154
B:87-154
2
BIR_REPEAT_2
PS50143
BIR repeat profile.
BIRC7_HUMAN
90-155
4
A:90-155
B:90-155
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2i3ha1 (A:78-167)
1b: SCOP_d2i3hb1 (B:78-167)
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(
)
(
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(
)
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)
(
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Small proteins
(3458)
Fold
:
Inhibitor of apoptosis (IAP) repeat
(71)
Superfamily
:
Inhibitor of apoptosis (IAP) repeat
(71)
Family
:
Inhibitor of apoptosis (IAP) repeat
(70)
Protein domain
:
BIR-containing protein 7 (ML-IAP, livin)
(8)
Human (Homo sapiens) [TaxId: 9606]
(8)
1a
d2i3ha1
A:78-167
1b
d2i3hb1
B:78-167
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2i3hB00 (B:78-172)
1b: CATH_2i3hA00 (A:78-167)
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Classes
(
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(
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(
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)
(
)
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(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A
(42)
Homologous Superfamily
:
Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A
(42)
Human (Homo sapiens)
(35)
1a
2i3hB00
B:78-172
1b
2i3hA00
A:78-167
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Pfam Domains
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Show PDB file:
Asym.Unit (80 KB)
Header - Asym.Unit
Biol.Unit 1 (36 KB)
Header - Biol.Unit 1
Biol.Unit 2 (39 KB)
Header - Biol.Unit 2
Biol.Unit 3 (141 KB)
Header - Biol.Unit 3
Biol.Unit 4 (72 KB)
Header - Biol.Unit 4
Biol.Unit 5 (138 KB)
Header - Biol.Unit 5
Biol.Unit 6 (138 KB)
Header - Biol.Unit 6
Biol.Unit 7 (71 KB)
Header - Biol.Unit 7
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