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Models
(28 )
Title
:
SOLUTION STRUCTURE OF THE RRM OF SRP20 BOUND TO THE RNA CAUC
Authors
:
Y. F. Hargous, F. H. Allain
Date
:
17 Aug 06 (Deposition) - 12 Dec 06 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A,B (28 x)
Keywords
:
Protein-Rna Complex Rrm Alpha-Beta Sandwich Beta1-Alpha1- Beta2-Beta3-Alpha2-Beta4, Rna Binding Protein/Chimera/Rna Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
Y. Hargous, G. M. Hautbergue, A. M. Tintaru, L. Skrisovska, A. P. Golovanov, J. Stevenin, L. Y. Lian, S. A. Wilson, F. H. Allain
Molecular Basis Of Rna Recognition And Tap Binding By The Sr Proteins Srp20 And 9G8.
Embo J. V. 25 5126 2006
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
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PROSITE Patterns/Profiles
(2, 2)
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1: RRM (A:74-147)
2: GRAM_POS_ANCHORING (A:134-150)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RRM
PS50102
Eukaryotic RNA Recognition Motif (RRM) profile.
SRSF3_HUMAN
10-83
1
A:74-147
2
GRAM_POS_ANCHORING
PS50847
Gram-positive cocci surface proteins LPxTG motif profile.
SPG2_STRSG
559-593
1
A:134-150
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Exons
(2, 2)
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Exon 1.2 (A:65-133)
Exon 1.3 (A:133-150)
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1: Boundary 1.1b/1.2
2: Boundary 1.2/1.3
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000373715
1b
ENSE00001848923
chr6:
36562145-36562258
114
SRSF3_HUMAN
-
0
0
-
-
1.2
ENST00000373715
2
ENSE00002148108
chr6:
36564538-36564745
208
SRSF3_HUMAN
1-69
69
1
A:65-133
69
1.3
ENST00000373715
3
ENSE00002189851
chr6:
36566626-36566760
135
SRSF3_HUMAN
69-114
46
1
A:133-150
18
1.5
ENST00000373715
5
ENSE00002186182
chr6:
36568929-36568967
39
SRSF3_HUMAN
114-127
14
0
-
-
1.6b
ENST00000373715
6b
ENSE00000849740
chr6:
36569485-36569571
87
SRSF3_HUMAN
127-156
30
0
-
-
1.7b
ENST00000373715
7b
ENSE00001027890
chr6:
36569739-36571209
1471
SRSF3_HUMAN
156-164
9
0
-
-
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