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Asym. Unit
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Asym.Unit (36 KB)
Biol.Unit 1 (31 KB)
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(1)
Title
:
STRUCTURE OF HUMAN SMG6 E1282C PIN DOMAIN MUTANT.
Authors
:
F. Glavan, I. Behm-Ansmant, E. Izaurralde, E. Conti
Date
:
02 Aug 06 (Deposition) - 14 Nov 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Rna Degradation, Decay, Nmd, Est1A, P Bodies, Rna Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Glavan, I. Behm-Ansmant, E. Izaurralde, E. Conti
Structures Of The Pin Domains Of Smg6 And Smg5 Reveal A Nuclease Within The Mrna Surveillance Complex.
Embo J. V. 25 5117 2006
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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Exons
(4, 4)
Info
All Exons
Exon 1.17 (A:1239-1279)
Exon 1.18 (A:1279-1348 (gaps))
Exon 1.19 (A:1351-1372)
Exon 1.20 (A:1380-1417)
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1: Boundary 1.16/1.17
2: Boundary 1.17/1.18
3: Boundary 1.18/1.19
4: Boundary 1.19/1.20
5: Boundary 1.20/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000263073
1
ENSE00001133693
chr17:
2207069-2206927
143
EST1A_HUMAN
1-30
30
0
-
-
1.2
ENST00000263073
2
ENSE00001116084
chr17:
2203958-2202200
1759
EST1A_HUMAN
30-616
587
0
-
-
1.3
ENST00000263073
3
ENSE00001116080
chr17:
2201349-2201157
193
EST1A_HUMAN
616-680
65
0
-
-
1.4
ENST00000263073
4
ENSE00001116081
chr17:
2200647-2200537
111
EST1A_HUMAN
681-717
37
0
-
-
1.5
ENST00000263073
5
ENSE00001116079
chr17:
2196271-2196165
107
EST1A_HUMAN
718-753
36
0
-
-
1.6
ENST00000263073
6
ENSE00001116082
chr17:
2195924-2195846
79
EST1A_HUMAN
753-779
27
0
-
-
1.7
ENST00000263073
7
ENSE00001116092
chr17:
2187029-2186919
111
EST1A_HUMAN
780-816
37
0
-
-
1.8
ENST00000263073
8
ENSE00001116083
chr17:
2186153-2185941
213
EST1A_HUMAN
817-887
71
0
-
-
1.9
ENST00000263073
9
ENSE00001116086
chr17:
2148013-2147952
62
EST1A_HUMAN
888-908
21
0
-
-
1.10
ENST00000263073
10
ENSE00001116090
chr17:
2139931-2139786
146
EST1A_HUMAN
908-957
50
0
-
-
1.11
ENST00000263073
11
ENSE00001048409
chr17:
2091809-2091693
117
EST1A_HUMAN
957-996
40
0
-
-
1.12
ENST00000263073
12
ENSE00001048425
chr17:
2090125-2089957
169
EST1A_HUMAN
996-1052
57
0
-
-
1.13
ENST00000263073
13
ENSE00000947188
chr17:
2076153-2075952
202
EST1A_HUMAN
1052-1119
68
0
-
-
1.15
ENST00000263073
15
ENSE00000875708
chr17:
1989195-1989019
177
EST1A_HUMAN
1120-1178
59
0
-
-
1.16
ENST00000263073
16
ENSE00000667874
chr17:
1985250-1985104
147
EST1A_HUMAN
1179-1227
49
0
-
-
1.17
ENST00000263073
17
ENSE00000875710
chr17:
1972225-1972072
154
EST1A_HUMAN
1228-1279
52
1
A:1239-1279
41
1.18
ENST00000263073
18
ENSE00000667870
chr17:
1968973-1968762
212
EST1A_HUMAN
1279-1349
71
1
A:1279-1348 (gaps)
70
1.19
ENST00000263073
19
ENSE00000875712
chr17:
1968448-1968367
82
EST1A_HUMAN
1350-1377
28
1
A:1351-1372
22
1.20
ENST00000263073
20
ENSE00001527783
chr17:
1964916-1963133
1784
EST1A_HUMAN
1377-1419
43
1
A:1380-1417
38
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Asym.Unit (36 KB)
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