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2HU2
Asym. Unit
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Asym.Unit (60 KB)
Biol.Unit 1 (108 KB)
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(1)
Title
:
CTBP/BARS IN TERNARY COMPLEX WITH NAD(H) AND RRTGAPPAL PEPTIDE
Authors
:
M. Nardini, M. Bolognesi, K. G. R. Quinlan, A. Verger, P. Francescato, M. Crossley
Date
:
26 Jul 06 (Deposition) - 31 Oct 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.85
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (2x)
Keywords
:
Transcription Co-Repressor, Zinc Finger Protein, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. G. R. Quinlan, M. Nardini, A. Verger, P. Francescato, P. Yaswen, D. Corda, M. Bolognesi, M. Crossley
Specific Recognition Of Znf217 And Other Zinc Finger Proteins At A Surface Groove Of C-Terminal Binding Proteins
Mol. Cell. Biol. V. 26 8159 2006
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: FORMIC ACID (FMTa)
2a: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADa)
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No.
Name
Count
Type
Full Name
1
FMT
1
Ligand/Ion
FORMIC ACID
2
NAD
1
Ligand/Ion
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
SER A:89 , GLY A:90 , THR A:117 , ILE A:169 , GLY A:170 , GLY A:172 , ARG A:173 , VAL A:174 , TYR A:192 , ASP A:193 , PRO A:194 , TYR A:195 , HIS A:225 , CYS A:226 , GLY A:227 , ASN A:229 , ASN A:232 , THR A:253 , ALA A:254 , ARG A:255 , ASP A:279 , HIS A:304 , ALA A:306 , TRP A:307 , HOH A:506 , HOH A:517
BINDING SITE FOR RESIDUE NAD A 600
2
AC2
SOFTWARE
TYR A:65 , HIS A:66 , ARG A:86 , ILE A:87 , TRP A:307
BINDING SITE FOR RESIDUE FMT A 801
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: D_2_HYDROXYACID_DH_1 (A:166-193)
2: D_2_HYDROXYACID_DH_3 (A:244-260)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
D_2_HYDROXYACID_DH_1
PS00065
D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature.
CTBP1_RAT
166-193
1
A:166-193
2
D_2_HYDROXYACID_DH_3
PS00671
D-isomer specific 2-hydroxyacid dehydrogenases signature 3.
CTBP1_RAT
244-260
1
A:244-260
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Exons
(1, 1)
Info
All Exons
Exon 1.7a (B:1-9)
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All Exon Boundaries
1: Boundary 1.6/1.7a
2: Boundary 1.7a/1.8
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.4
ENST00000371471
4
ENSE00001523402
chr20:
52210378-52210295
84
ZN217_HUMAN
-
0
0
-
-
1.5b
ENST00000371471
5b
ENSE00002162750
chr20:
52199707-52198000
1708
ZN217_HUMAN
1-456
456
0
-
-
1.6
ENST00000371471
6
ENSE00001722637
chr20:
52194989-52194873
117
ZN217_HUMAN
456-495
40
0
-
-
1.7a
ENST00000371471
7a
ENSE00001742197
chr20:
52193819-52192266
1554
ZN217_HUMAN
495-1013
519
1
B:1-9
9
1.8
ENST00000371471
8
ENSE00001143007
chr20:
52188392-52188260
133
ZN217_HUMAN
1013-1048
36
0
-
-
1.9d
ENST00000371471
9d
ENSE00001455296
chr20:
52185803-52183604
2200
ZN217_HUMAN
-
0
0
-
-
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SCOP Domains
(0, 0)
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2hu2A02 (A:114-307)
1b: CATH_2hu2A01 (A:15-113,A:308-345)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
NAD(P)-binding Rossmann-like Domain
(1244)
Norway rat (Rattus norvegicus)
(18)
1a
2hu2A02
A:114-307
1b
2hu2A01
A:15-113,A:308-345
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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