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2HL6
Biol. Unit 2
Info
Asym.Unit (105 KB)
Biol.Unit 1 (51 KB)
Biol.Unit 2 (52 KB)
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(1)
Title
:
STRUCTURE OF HOMOLOGOUSLY EXPRESSED FERRULATE ESTERASE OF ASPERGILLUS NIGER IN COMPLEX WITH CAPS
Authors
:
G. Parsiegla, I. Herpoel-Gimbert, J. Dubots
Date
:
06 Jul 06 (Deposition) - 31 Oct 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.55
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Esterase, A/B Hydrolase Fold, Glycosylated, Caps, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
I. Benoit, M. Asther, G. Sulzenbacher, E. Record, L. Marmuse, G. Parsiegla, I. Herpoel-Gimbert, M. Asther, C. Bignon
Respective Importance Of Protein Folding And Glycosylation In The Thermal Stability Of Recombinant Feruloyl Esterase A
Febs Lett. V. 580 5815 2006
[
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Hetero Components
(5, 12)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
1b: BETA-D-MANNOSE (BMAb)
2a: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID (CXSa)
2b: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID (CXSb)
3a: 1,2-ETHANEDIOL (EDOa)
3b: 1,2-ETHANEDIOL (EDOb)
3c: 1,2-ETHANEDIOL (EDOc)
3d: 1,2-ETHANEDIOL (EDOd)
3e: 1,2-ETHANEDIOL (EDOe)
3f: 1,2-ETHANEDIOL (EDOf)
3g: 1,2-ETHANEDIOL (EDOg)
3h: 1,2-ETHANEDIOL (EDOh)
4a: ALPHA-D-MANNOSE (MANa)
4b: ALPHA-D-MANNOSE (MANb)
5a: N-ACETYL-D-GLUCOSAMINE (NAGa)
5b: N-ACETYL-D-GLUCOSAMINE (NAGb)
5c: N-ACETYL-D-GLUCOSAMINE (NAGc)
5d: N-ACETYL-D-GLUCOSAMINE (NAGd)
6a: SULFATE ION (SO4a)
6b: SULFATE ION (SO4b)
6c: SULFATE ION (SO4c)
6d: SULFATE ION (SO4d)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BMA
1
Ligand/Ion
BETA-D-MANNOSE
2
CXS
1
Ligand/Ion
3-CYCLOHEXYL-1-PROPYLSULFONIC ACID
3
EDO
6
Ligand/Ion
1,2-ETHANEDIOL
4
MAN
-1
Ligand/Ion
ALPHA-D-MANNOSE
5
NAG
2
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
6
SO4
2
Ligand/Ion
SULFATE ION
[
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Sites
(15, 15)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC6 (SOFTWARE)
03: AC7 (SOFTWARE)
04: AC8 (SOFTWARE)
05: BC1 (SOFTWARE)
06: BC2 (SOFTWARE)
07: BC3 (SOFTWARE)
08: BC6 (SOFTWARE)
09: BC7 (SOFTWARE)
10: BC8 (SOFTWARE)
11: BC9 (SOFTWARE)
12: CC1 (SOFTWARE)
13: CC2 (SOFTWARE)
14: CC3 (SOFTWARE)
15: CC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:79 , THR A:83 , GLY A:98 , ILE A:102 , NAG A:301 , HOH A:335 , HOH A:414 , HOH A:555 , SO4 B:272
BINDING SITE FOR RESIDUE NAG A 300
02
AC6
SOFTWARE
SO4 A:273 , GLN B:75 , ASN B:79 , THR B:83 , GLY B:98 , ILE B:102 , NAG B:311 , HOH B:405 , HOH B:432 , HOH B:517 , HOH B:598
BINDING SITE FOR RESIDUE NAG B 310
03
AC7
SOFTWARE
LEU B:82 , THR B:83 , NAG B:310 , BMA B:312 , HOH B:518 , HOH B:532
BINDING SITE FOR RESIDUE NAG B 311
04
AC8
SOFTWARE
NAG B:311 , HOH B:452
BINDING SITE FOR RESIDUE BMA B 312
05
BC1
SOFTWARE
ARG B:162 , ALA B:207 , HIS B:208 , GLU B:236 , HOH B:438 , HOH B:545
BINDING SITE FOR RESIDUE SO4 B 271
06
BC2
SOFTWARE
NAG A:300 , HOH A:499 , ASN B:193 , GLY B:240 , GLN B:241 , ASN B:244 , HOH B:357 , HOH B:425 , HOH B:431
BINDING SITE FOR RESIDUE SO4 B 272
07
BC3
SOFTWARE
ASN A:193 , GLY A:239 , GLY A:240 , GLN A:241 , ASN A:244 , HOH A:343 , NAG B:310 , HOH B:405 , HOH B:496 , HOH B:517
BINDING SITE FOR RESIDUE SO4 A 273
08
BC6
SOFTWARE
ASP B:77 , TYR B:80 , HIS B:97 , TYR B:100 , EDO B:293 , HOH B:574
BINDING SITE FOR RESIDUE EDO B 292
09
BC7
SOFTWARE
LEU B:74 , ASP B:77 , VAL B:243 , EDO B:292 , HOH B:483
BINDING SITE FOR RESIDUE EDO B 293
10
BC8
SOFTWARE
SER B:255 , GLY B:256 , ALA B:257 , CXS B:281
BINDING SITE FOR RESIDUE EDO B 294
11
BC9
SOFTWARE
GLU B:160 , SER B:163 , GLY B:164 , PHE B:168 , ALA B:169 , TYR B:186 , ALA B:207 , GLY B:209 , HOH B:326
BINDING SITE FOR RESIDUE EDO B 295
12
CC1
SOFTWARE
ASN B:165 , GLN B:166 , ALA B:167 , GLY B:205 , HOH B:374 , HOH B:551 , HOH B:570
BINDING SITE FOR RESIDUE EDO B 296
13
CC2
SOFTWARE
ARG B:162 , PRO B:201 , ALA B:202 , GLU B:203 , HOH B:449 , HOH B:563 , HOH B:583
BINDING SITE FOR RESIDUE EDO B 297
14
CC3
SOFTWARE
TYR A:25 , THR A:68 , SER A:133 , HIS A:247 , SER A:255 , GLY A:256 , HOH A:462 , HOH A:505 , HOH A:566 , ASP B:71 , LEU B:74
BINDING SITE FOR RESIDUE CXS A 280
15
CC4
SOFTWARE
ASP A:71 , LEU A:74 , HOH A:420 , TYR B:25 , THR B:68 , SER B:133 , HIS B:247 , SER B:255 , GLY B:256 , EDO B:294 , HOH B:322
BINDING SITE FOR RESIDUE CXS B 281
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: LIPASE_SER (B:127-136)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
LIPASE_SER
PS00120
Lipases, serine active site.
FAEA_ASPNG
148-157
1
-
B:127-136
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2hl6a_ (A:)
1b: SCOP_d2hl6b_ (B:)
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Classes
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)
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(
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
alpha/beta-Hydrolases
(971)
Superfamily
:
alpha/beta-Hydrolases
(971)
Family
:
Fungal lipases
(53)
Protein domain
:
Feruloyl esterase A
(5)
Aspergillus niger [TaxId: 5061]
(5)
1a
d2hl6a_
A:
1b
d2hl6b_
B:
[
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2hl6A00 (A:1-260)
1b: CATH_2hl6B00 (B:1-260)
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Topologies
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(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.1820, no name defined]
(692)
Aspergillus niger. Organism_taxid: 5061.
(2)
1a
2hl6A00
A:1-260
1b
2hl6B00
B:1-260
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Atom Selection
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Protein
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Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain B
Asymmetric Unit 1
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Asym.Unit (105 KB)
Header - Asym.Unit
Biol.Unit 1 (51 KB)
Header - Biol.Unit 1
Biol.Unit 2 (52 KB)
Header - Biol.Unit 2
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