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2HIL
Biol. Unit 1
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Asym.Unit (456 KB)
Biol.Unit 1 (444 KB)
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(1)
Title
:
STRUCTURE OF THE NEISSERIA GONORRHOEAE TYPE IV PILUS FILAMENT FROM X-RAY CRYSTALLOGRAPHY AND ELECTRON CRYOMICROSCOPY
Authors
:
L. Craig, N. Volkmann, E. H. Egelman, J. A. Tainer
Date
:
29 Jun 06 (Deposition) - 12 Sep 06 (Release) - 30 Jun 10 (Revision)
Method
:
ELECTRON MICROSCOPY
Resolution
:
12.50
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R (1x)
Keywords
:
Type Iv Pili, Virulence Factors, Dna Binding Protein, Natural Transformation, Antigenic Variation, Cell Adhesion
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Craig, N. Volkmann, A. S. Arvai, M. E. Pique, M. Yeager, E. H. Egelman, J. A. Tainer
Type Iv Pilus Structure By Cryo-Electron Microscopy And Crystallography: Implications For Pilus Assembly And Functions.
Mol. Cell V. 23 651 2006
[
close entry info
]
Hetero Components
(4, 72)
Info
All Hetero Components
1a: 2,4-BIS(ACETYLAMINO)-1,5-ANHYDRO-2... (DT6a)
1b: 2,4-BIS(ACETYLAMINO)-1,5-ANHYDRO-2... (DT6b)
1c: 2,4-BIS(ACETYLAMINO)-1,5-ANHYDRO-2... (DT6c)
1d: 2,4-BIS(ACETYLAMINO)-1,5-ANHYDRO-2... (DT6d)
1e: 2,4-BIS(ACETYLAMINO)-1,5-ANHYDRO-2... (DT6e)
1f: 2,4-BIS(ACETYLAMINO)-1,5-ANHYDRO-2... (DT6f)
1g: 2,4-BIS(ACETYLAMINO)-1,5-ANHYDRO-2... (DT6g)
1h: 2,4-BIS(ACETYLAMINO)-1,5-ANHYDRO-2... (DT6h)
1i: 2,4-BIS(ACETYLAMINO)-1,5-ANHYDRO-2... (DT6i)
1j: 2,4-BIS(ACETYLAMINO)-1,5-ANHYDRO-2... (DT6j)
1k: 2,4-BIS(ACETYLAMINO)-1,5-ANHYDRO-2... (DT6k)
1l: 2,4-BIS(ACETYLAMINO)-1,5-ANHYDRO-2... (DT6l)
1m: 2,4-BIS(ACETYLAMINO)-1,5-ANHYDRO-2... (DT6m)
1n: 2,4-BIS(ACETYLAMINO)-1,5-ANHYDRO-2... (DT6n)
1o: 2,4-BIS(ACETYLAMINO)-1,5-ANHYDRO-2... (DT6o)
1p: 2,4-BIS(ACETYLAMINO)-1,5-ANHYDRO-2... (DT6p)
1q: 2,4-BIS(ACETYLAMINO)-1,5-ANHYDRO-2... (DT6q)
1r: 2,4-BIS(ACETYLAMINO)-1,5-ANHYDRO-2... (DT6r)
2a: ALPHA D-GALACTOSE (GLAa)
2b: ALPHA D-GALACTOSE (GLAb)
2c: ALPHA D-GALACTOSE (GLAc)
2d: ALPHA D-GALACTOSE (GLAd)
2e: ALPHA D-GALACTOSE (GLAe)
2f: ALPHA D-GALACTOSE (GLAf)
2g: ALPHA D-GALACTOSE (GLAg)
2h: ALPHA D-GALACTOSE (GLAh)
2i: ALPHA D-GALACTOSE (GLAi)
2j: ALPHA D-GALACTOSE (GLAj)
2k: ALPHA D-GALACTOSE (GLAk)
2l: ALPHA D-GALACTOSE (GLAl)
2m: ALPHA D-GALACTOSE (GLAm)
2n: ALPHA D-GALACTOSE (GLAn)
2o: ALPHA D-GALACTOSE (GLAo)
2p: ALPHA D-GALACTOSE (GLAp)
2q: ALPHA D-GALACTOSE (GLAq)
2r: ALPHA D-GALACTOSE (GLAr)
3a: N-METHYLPHENYLALANINE (MEAa)
3b: N-METHYLPHENYLALANINE (MEAb)
3c: N-METHYLPHENYLALANINE (MEAc)
3d: N-METHYLPHENYLALANINE (MEAd)
3e: N-METHYLPHENYLALANINE (MEAe)
3f: N-METHYLPHENYLALANINE (MEAf)
3g: N-METHYLPHENYLALANINE (MEAg)
3h: N-METHYLPHENYLALANINE (MEAh)
3i: N-METHYLPHENYLALANINE (MEAi)
3j: N-METHYLPHENYLALANINE (MEAj)
3k: N-METHYLPHENYLALANINE (MEAk)
3l: N-METHYLPHENYLALANINE (MEAl)
3m: N-METHYLPHENYLALANINE (MEAm)
3n: N-METHYLPHENYLALANINE (MEAn)
3o: N-METHYLPHENYLALANINE (MEAo)
3p: N-METHYLPHENYLALANINE (MEAp)
3q: N-METHYLPHENYLALANINE (MEAq)
3r: N-METHYLPHENYLALANINE (MEAr)
4a: PHOSPHORIC ACID MONO-(2-AMINO-ETHY... (OPEa)
4b: PHOSPHORIC ACID MONO-(2-AMINO-ETHY... (OPEb)
4c: PHOSPHORIC ACID MONO-(2-AMINO-ETHY... (OPEc)
4d: PHOSPHORIC ACID MONO-(2-AMINO-ETHY... (OPEd)
4e: PHOSPHORIC ACID MONO-(2-AMINO-ETHY... (OPEe)
4f: PHOSPHORIC ACID MONO-(2-AMINO-ETHY... (OPEf)
4g: PHOSPHORIC ACID MONO-(2-AMINO-ETHY... (OPEg)
4h: PHOSPHORIC ACID MONO-(2-AMINO-ETHY... (OPEh)
4i: PHOSPHORIC ACID MONO-(2-AMINO-ETHY... (OPEi)
4j: PHOSPHORIC ACID MONO-(2-AMINO-ETHY... (OPEj)
4k: PHOSPHORIC ACID MONO-(2-AMINO-ETHY... (OPEk)
4l: PHOSPHORIC ACID MONO-(2-AMINO-ETHY... (OPEl)
4m: PHOSPHORIC ACID MONO-(2-AMINO-ETHY... (OPEm)
4n: PHOSPHORIC ACID MONO-(2-AMINO-ETHY... (OPEn)
4o: PHOSPHORIC ACID MONO-(2-AMINO-ETHY... (OPEo)
4p: PHOSPHORIC ACID MONO-(2-AMINO-ETHY... (OPEp)
4q: PHOSPHORIC ACID MONO-(2-AMINO-ETHY... (OPEq)
4r: PHOSPHORIC ACID MONO-(2-AMINO-ETHY... (OPEr)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
DT6
18
Ligand/Ion
2,4-BIS(ACETYLAMINO)-1,5-ANHYDRO-2,4-DIDEOXY-D-GLUCITOL
2
GLA
18
Ligand/Ion
ALPHA D-GALACTOSE
3
MEA
18
Mod. Amino Acid
N-METHYLPHENYLALANINE
4
OPE
18
Ligand/Ion
PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
[
close Hetero Component info
]
Sites
(54, 54)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
51: FC6 (SOFTWARE)
52: FC7 (SOFTWARE)
53: FC8 (SOFTWARE)
54: FC9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
DT6 A:161
BINDING SITE FOR RESIDUE GLA A 160
02
AC2
SOFTWARE
TYR A:50 , GLU A:59 , ASN A:60 , SER A:63 , GLA A:160
BINDING SITE FOR RESIDUE DT6 A 161
03
AC3
SOFTWARE
DT6 B:161
BINDING SITE FOR RESIDUE GLA B 160
04
AC4
SOFTWARE
TYR B:50 , GLU B:59 , ASN B:60 , SER B:63 , GLA B:160
BINDING SITE FOR RESIDUE DT6 B 161
05
AC5
SOFTWARE
DT6 C:161
BINDING SITE FOR RESIDUE GLA C 160
06
AC6
SOFTWARE
TYR C:50 , GLU C:59 , ASN C:60 , SER C:63 , GLA C:160
BINDING SITE FOR RESIDUE DT6 C 161
07
AC7
SOFTWARE
DT6 D:161
BINDING SITE FOR RESIDUE GLA D 160
08
AC8
SOFTWARE
TYR D:50 , GLU D:59 , ASN D:60 , SER D:63 , GLA D:160
BINDING SITE FOR RESIDUE DT6 D 161
09
AC9
SOFTWARE
DT6 E:161
BINDING SITE FOR RESIDUE GLA E 160
10
BC1
SOFTWARE
TYR E:50 , GLU E:59 , ASN E:60 , SER E:63 , GLA E:160
BINDING SITE FOR RESIDUE DT6 E 161
11
BC2
SOFTWARE
DT6 F:161
BINDING SITE FOR RESIDUE GLA F 160
12
BC3
SOFTWARE
TYR F:50 , GLU F:59 , ASN F:60 , SER F:63 , GLA F:160
BINDING SITE FOR RESIDUE DT6 F 161
13
BC4
SOFTWARE
DT6 G:161
BINDING SITE FOR RESIDUE GLA G 160
14
BC5
SOFTWARE
TYR G:50 , GLU G:59 , ASN G:60 , SER G:63 , GLA G:160
BINDING SITE FOR RESIDUE DT6 G 161
15
BC6
SOFTWARE
DT6 H:161
BINDING SITE FOR RESIDUE GLA H 160
16
BC7
SOFTWARE
TYR H:50 , GLU H:59 , ASN H:60 , SER H:63 , GLA H:160
BINDING SITE FOR RESIDUE DT6 H 161
17
BC8
SOFTWARE
DT6 I:161
BINDING SITE FOR RESIDUE GLA I 160
18
BC9
SOFTWARE
TYR I:50 , GLU I:59 , ASN I:60 , SER I:63 , GLA I:160
BINDING SITE FOR RESIDUE DT6 I 161
19
CC1
SOFTWARE
DT6 J:161
BINDING SITE FOR RESIDUE GLA J 160
20
CC2
SOFTWARE
TYR J:50 , GLU J:59 , ASN J:60 , SER J:63 , GLA J:160
BINDING SITE FOR RESIDUE DT6 J 161
21
CC3
SOFTWARE
DT6 K:161
BINDING SITE FOR RESIDUE GLA K 160
22
CC4
SOFTWARE
TYR K:50 , GLU K:59 , ASN K:60 , SER K:63 , GLA K:160
BINDING SITE FOR RESIDUE DT6 K 161
23
CC5
SOFTWARE
DT6 L:161
BINDING SITE FOR RESIDUE GLA L 160
24
CC6
SOFTWARE
TYR L:50 , GLU L:59 , ASN L:60 , SER L:63 , GLA L:160
BINDING SITE FOR RESIDUE DT6 L 161
25
CC7
SOFTWARE
DT6 M:161
BINDING SITE FOR RESIDUE GLA M 160
26
CC8
SOFTWARE
TYR M:50 , GLU M:59 , ASN M:60 , SER M:63 , GLA M:160
BINDING SITE FOR RESIDUE DT6 M 161
27
CC9
SOFTWARE
DT6 N:161
BINDING SITE FOR RESIDUE GLA N 160
28
DC1
SOFTWARE
TYR N:50 , GLU N:59 , ASN N:60 , SER N:63 , GLA N:160
BINDING SITE FOR RESIDUE DT6 N 161
29
DC2
SOFTWARE
DT6 O:161
BINDING SITE FOR RESIDUE GLA O 160
30
DC3
SOFTWARE
TYR O:50 , GLU O:59 , ASN O:60 , SER O:63 , GLA O:160
BINDING SITE FOR RESIDUE DT6 O 161
31
DC4
SOFTWARE
DT6 P:161
BINDING SITE FOR RESIDUE GLA P 160
32
DC5
SOFTWARE
TYR P:50 , GLU P:59 , ASN P:60 , SER P:63 , GLA P:160
BINDING SITE FOR RESIDUE DT6 P 161
33
DC6
SOFTWARE
DT6 Q:161
BINDING SITE FOR RESIDUE GLA Q 160
34
DC7
SOFTWARE
TYR Q:50 , GLU Q:59 , ASN Q:60 , SER Q:63 , GLA Q:160
BINDING SITE FOR RESIDUE DT6 Q 161
35
DC8
SOFTWARE
DT6 R:161
BINDING SITE FOR RESIDUE GLA R 160
36
DC9
SOFTWARE
TYR R:50 , GLU R:59 , ASN R:60 , SER R:63 , GLA R:160
BINDING SITE FOR RESIDUE DT6 R 161
37
EC1
SOFTWARE
SER A:68 , SER A:69
BINDING SITE FOR RESIDUE OPE A 824
38
EC2
SOFTWARE
SER B:68 , SER B:69
BINDING SITE FOR RESIDUE OPE B 824
39
EC3
SOFTWARE
SER C:68 , SER C:69
BINDING SITE FOR RESIDUE OPE C 824
40
EC4
SOFTWARE
SER D:68 , SER D:69
BINDING SITE FOR RESIDUE OPE D 824
41
EC5
SOFTWARE
SER E:68 , SER E:69
BINDING SITE FOR RESIDUE OPE E 824
42
EC6
SOFTWARE
SER F:68 , SER F:69
BINDING SITE FOR RESIDUE OPE F 824
43
EC7
SOFTWARE
SER G:68 , SER G:69
BINDING SITE FOR RESIDUE OPE G 824
44
EC8
SOFTWARE
SER H:68 , SER H:69
BINDING SITE FOR RESIDUE OPE H 824
45
EC9
SOFTWARE
SER I:68 , SER I:69
BINDING SITE FOR RESIDUE OPE I 824
46
FC1
SOFTWARE
SER J:68 , SER J:69
BINDING SITE FOR RESIDUE OPE J 824
47
FC2
SOFTWARE
SER K:68 , SER K:69
BINDING SITE FOR RESIDUE OPE K 824
48
FC3
SOFTWARE
SER L:68 , SER L:69
BINDING SITE FOR RESIDUE OPE L 824
49
FC4
SOFTWARE
SER M:68 , SER M:69
BINDING SITE FOR RESIDUE OPE M 824
50
FC5
SOFTWARE
SER N:68 , SER N:69
BINDING SITE FOR RESIDUE OPE N 824
51
FC6
SOFTWARE
SER O:68 , SER O:69
BINDING SITE FOR RESIDUE OPE O 824
52
FC7
SOFTWARE
SER P:68 , SER P:69
BINDING SITE FOR RESIDUE OPE P 824
53
FC8
SOFTWARE
SER Q:68 , SER Q:69
BINDING SITE FOR RESIDUE OPE Q 824
54
FC9
SOFTWARE
SER R:68 , SER R:69
BINDING SITE FOR RESIDUE OPE R 824
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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