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Getting 'Biological Unit' information from database.
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Getting 'Exon' information from database.
2HEH
Asym. Unit
Info
Asym.Unit (59 KB)
Biol.Unit 1 (54 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE KIF2C MOTOR DOMAIN (CASP TARGET)
Authors
:
J. Wang, Y. Shen, W. Tempel, R. Landry, C. H. Arrowsmith, A. M. Edwards, M. Sundstrom, J. Weigelt, A. Bochkarev, H. Park, Structural Genomics Consortium (Sgc)
Date
:
21 Jun 06 (Deposition) - 18 Jul 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.15
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Kinesin, Motor Domain, Adp, Structural Genomics, Structural Genomics Consortium, Sgc, Structural Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Wang, Y. Shen, W. Tempel, R. Landry, C. H. Arrowsmith, A. M. Edwards, M. Sundstrom, J. Weigelt, A. Bochkarev, H. Park
Crystal Structure Of The Kif2C Motor Domain
To Be Published
(for further references see the
PDB file header
)
[
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Hetero Components
(3, 12)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
2a: MAGNESIUM ION (MGa)
3a: UNKNOWN ATOM OR ION (UNXa)
3b: UNKNOWN ATOM OR ION (UNXb)
3c: UNKNOWN ATOM OR ION (UNXc)
3d: UNKNOWN ATOM OR ION (UNXd)
3e: UNKNOWN ATOM OR ION (UNXe)
3f: UNKNOWN ATOM OR ION (UNXf)
3g: UNKNOWN ATOM OR ION (UNXg)
3h: UNKNOWN ATOM OR ION (UNXh)
3i: UNKNOWN ATOM OR ION (UNXi)
3j: UNKNOWN ATOM OR ION (UNXj)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ADP
1
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
MG
1
Ligand/Ion
MAGNESIUM ION
3
UNX
10
Ligand/Ion
UNKNOWN ATOM OR ION
[
close Hetero Component info
]
Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
THR A:355 , ADP A:601 , HOH A:704 , HOH A:705 , HOH A:706 , HOH A:707
BINDING SITE FOR RESIDUE MG A 602
02
AC2
SOFTWARE
ARG A:264 , ARG A:266 , PRO A:267 , GLN A:349 , THR A:350 , GLY A:351 , SER A:352 , GLY A:353 , LYS A:354 , THR A:355 , HIS A:356 , MG A:602 , HOH A:705 , HOH A:706 , HOH A:707 , HOH A:718 , HOH A:719 , HOH A:733
BINDING SITE FOR RESIDUE ADP A 601
03
AC3
SOFTWARE
VAL A:421 , LYS A:543
BINDING SITE FOR RESIDUE UNX A 801
04
AC4
SOFTWARE
ILE A:404 , SER A:519 , LYS A:543 , LEU A:544
BINDING SITE FOR RESIDUE UNX A 802
05
AC5
SOFTWARE
LYS A:297
BINDING SITE FOR RESIDUE UNX A 803
06
AC6
SOFTWARE
GLU A:305 , ASN A:306 , GLN A:307 , ARG A:580
BINDING SITE FOR RESIDUE UNX A 804
07
AC7
SOFTWARE
GLU A:436 , MET A:484 , LYS A:487
BINDING SITE FOR RESIDUE UNX A 805
08
AC8
SOFTWARE
ASP A:424
BINDING SITE FOR RESIDUE UNX A 806
09
AC9
SOFTWARE
ILE A:259
BINDING SITE FOR RESIDUE UNX A 807
10
BC1
SOFTWARE
MET A:358 , GLY A:359 , GLY A:372 , TYR A:374 , ALA A:375
BINDING SITE FOR RESIDUE UNX A 808
11
BC2
SOFTWARE
LEU A:384
BINDING SITE FOR RESIDUE UNX A 809
12
BC3
SOFTWARE
GLN A:427 , HIS A:536 , THR A:537 , PHE A:539 , ARG A:549 , HOH A:709
BINDING SITE FOR RESIDUE UNX A 810
[
close Site info
]
SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_049683 (I449L, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_049683
I
449
L
KIF2C_HUMAN
Polymorphism
4342887
A
I
449
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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]
PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: KINESIN_MOTOR_2 (A:258-587)
2: KINESIN_MOTOR_1 (A:486-497)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
KINESIN_MOTOR_2
PS50067
Kinesin motor domain profile.
KIF2C_HUMAN
258-588
1
A:258-587
2
KINESIN_MOTOR_1
PS00411
Kinesin motor domain signature.
KIF2C_HUMAN
486-497
1
A:486-497
[
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]
Exons
(11, 11)
Info
All Exons
Exon 1.9 (A:229-253)
Exon 1.10 (A:254-272)
Exon 1.11c (A:272-326)
Exon 1.12 (A:326-356)
Exon 1.13b (A:357-378 (gaps))
Exon 1.14 (A:378-408)
Exon 1.15 (A:409-456)
Exon 1.16a (A:456-524 (gaps))
Exon 1.17 (A:525-561)
Exon 1.18 (A:562-584)
Exon 1.19c (A:584-587)
View:
Select:
Label:
All Exon Boundaries
01: Boundary 1.8/1.9
02: Boundary 1.9/1.10
03: Boundary 1.10/1.11c
04: Boundary 1.11c/1.12
05: Boundary 1.12/1.13b
06: Boundary 1.13b/1.14
07: Boundary 1.14/1.15
08: Boundary 1.15/1.16a
09: Boundary 1.16a/1.17
10: Boundary 1.17/1.18
11: Boundary 1.18/1.19c
12: Boundary 1.19c/1.20b
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000372224
1b
ENSE00001945221
chr1:
45205492-45205674
183
KIF2C_HUMAN
1-24
24
0
-
-
1.2
ENST00000372224
2
ENSE00001734334
chr1:
45206585-45206679
95
KIF2C_HUMAN
24-55
32
0
-
-
1.4
ENST00000372224
4
ENSE00001752907
chr1:
45213056-45213157
102
KIF2C_HUMAN
56-89
34
0
-
-
1.5
ENST00000372224
5
ENSE00001769500
chr1:
45213324-45213372
49
KIF2C_HUMAN
90-106
17
0
-
-
1.6b
ENST00000372224
6b
ENSE00001627695
chr1:
45216114-45216236
123
KIF2C_HUMAN
106-147
42
0
-
-
1.7b
ENST00000372224
7b
ENSE00001631477
chr1:
45218804-45218926
123
KIF2C_HUMAN
147-188
42
0
-
-
1.8
ENST00000372224
8
ENSE00001659028
chr1:
45219405-45219505
101
KIF2C_HUMAN
188-221
34
0
-
-
1.9
ENST00000372224
9
ENSE00001734027
chr1:
45220422-45220517
96
KIF2C_HUMAN
222-253
32
1
A:229-253
25
1.10
ENST00000372224
10
ENSE00001652465
chr1:
45221601-45221655
55
KIF2C_HUMAN
254-272
19
1
A:254-272
19
1.11c
ENST00000372224
11c
ENSE00002151499
chr1:
45221747-45221909
163
KIF2C_HUMAN
272-326
55
1
A:272-326
55
1.12
ENST00000372224
12
ENSE00001631000
chr1:
45223228-45223318
91
KIF2C_HUMAN
326-356
31
1
A:326-356
31
1.13b
ENST00000372224
13b
ENSE00002181680
chr1:
45223580-45223643
64
KIF2C_HUMAN
357-378
22
1
A:357-378 (gaps)
22
1.14
ENST00000372224
14
ENSE00001678770
chr1:
45223721-45223812
92
KIF2C_HUMAN
378-408
31
1
A:378-408
31
1.15
ENST00000372224
15
ENSE00001689958
chr1:
45224878-45225020
143
KIF2C_HUMAN
409-456
48
1
A:409-456
48
1.16a
ENST00000372224
16a
ENSE00001770471
chr1:
45225952-45226156
205
KIF2C_HUMAN
456-524
69
1
A:456-524 (gaps)
69
1.17
ENST00000372224
17
ENSE00001712066
chr1:
45226264-45226374
111
KIF2C_HUMAN
525-561
37
1
A:525-561
37
1.18
ENST00000372224
18
ENSE00001662209
chr1:
45227588-45227655
68
KIF2C_HUMAN
562-584
23
1
A:562-584
23
1.19c
ENST00000372224
19c
ENSE00001747875
chr1:
45228018-45228123
106
KIF2C_HUMAN
584-619
36
1
A:584-587
4
1.20b
ENST00000372224
20b
ENSE00001685683
chr1:
45228217-45228330
114
KIF2C_HUMAN
620-657
38
0
-
-
1.21b
ENST00000372224
21b
ENSE00001726373
chr1:
45232498-45232621
124
KIF2C_HUMAN
658-699
42
0
-
-
1.22b
ENST00000372224
22b
ENSE00001457243
chr1:
45232769-45233439
671
KIF2C_HUMAN
699-725
27
0
-
-
[
close EXON info
]
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2heha_ (A:)
View:
Select:
Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
Motor proteins
(119)
Protein domain
:
Kinesin
(31)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d2heha_
A:
[
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2hehA00 (A:229-587)
View:
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(
)
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)
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)
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(
)
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)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Kinesin
(69)
Homologous Superfamily
:
Kinesin
(69)
Human (Homo sapiens)
(36)
1a
2hehA00
A:229-587
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
Select:
Label:
Sorry, no Info available
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