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Asym. Unit
Info
Asym.Unit (193 KB)
Biol.Unit 1 (186 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF MOUSE ACETYLCHOLINESTERASE COMPLEXED WITH 4-KETOAMYLTRIMETHYLAMMONIUM
Authors
:
Y. Bourne, Z. Radic, G. Sulzenbacher, E. Kim, P. Taylor, P. Marchot
Date
:
12 Jun 06 (Deposition) - 18 Jul 06 (Release) - 05 Oct 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Hydrolase Fold, Serine Esterase, Acetylcholinesterase, Homodimer, Glycosylated Protein, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Bourne, Z. Radic, G. Sulzenbacher, E. Kim, P. Taylor, P. Marchot
Substrate And Product Trafficking Through The Active Center Gorge Of Acetylcholinesterase Analyzed By Crystallography And Equilibrium Binding
J. Biol. Chem. V. 281 29256 2006
[
close entry info
]
Hetero Components
(6, 23)
Info
All Hetero Components
1a: N,N,N-TRIMETHYL-4-OXOPENTAN-1-AMIN... (CHHa)
1b: N,N,N-TRIMETHYL-4-OXOPENTAN-1-AMIN... (CHHb)
2a: ALPHA-L-FUCOSE (FUCa)
3a: IODIDE ION (IODa)
3b: IODIDE ION (IODb)
3c: IODIDE ION (IODc)
3d: IODIDE ION (IODd)
3e: IODIDE ION (IODe)
3f: IODIDE ION (IODf)
3g: IODIDE ION (IODg)
3h: IODIDE ION (IODh)
3i: IODIDE ION (IODi)
3j: IODIDE ION (IODj)
3k: IODIDE ION (IODk)
3l: IODIDE ION (IODl)
3m: IODIDE ION (IODm)
3n: IODIDE ION (IODn)
4a: N-ACETYL-D-GLUCOSAMINE (NAGa)
4b: N-ACETYL-D-GLUCOSAMINE (NAGb)
4c: N-ACETYL-D-GLUCOSAMINE (NAGc)
5a: 4,4-DIHYDROXY-N,N,N-TRIMETHYLPENTA... (NWAa)
5b: 4,4-DIHYDROXY-N,N,N-TRIMETHYLPENTA... (NWAb)
6a: HEXAETHYLENE GLYCOL (P6Ga)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CHH
2
Ligand/Ion
N,N,N-TRIMETHYL-4-OXOPENTAN-1-AMINIUM
2
FUC
1
Ligand/Ion
ALPHA-L-FUCOSE
3
IOD
14
Ligand/Ion
IODIDE ION
4
NAG
3
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
5
NWA
2
Ligand/Ion
4,4-DIHYDROXY-N,N,N-TRIMETHYLPENTAN-1-AMINIUM
6
P6G
1
Ligand/Ion
HEXAETHYLENE GLYCOL
[
close Hetero Component info
]
Sites
(21, 21)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER A:347 , ASN A:350 , FUC A:545 , HOH A:1709 , HOH A:1783 , HOH A:1852 , HOH A:1931
BINDING SITE FOR RESIDUE NAG A 544
02
AC2
SOFTWARE
ASP A:349 , ASN A:350 , NAG A:544
BINDING SITE FOR RESIDUE FUC A 545
03
AC3
SOFTWARE
SER B:347 , ASN B:350
BINDING SITE FOR RESIDUE NAG B 1601
04
AC4
SOFTWARE
SER A:462 , ASN A:464
BINDING SITE FOR RESIDUE NAG A 701
05
AC5
SOFTWARE
PRO A:290 , SER A:293
BINDING SITE FOR RESIDUE IOD A 1101
06
AC6
SOFTWARE
SER B:293 , HOH B:2767
BINDING SITE FOR RESIDUE IOD B 1102
07
AC7
SOFTWARE
ARG A:245
BINDING SITE FOR RESIDUE IOD A 1103
08
AC8
SOFTWARE
ASN A:233 , HOH A:1839
BINDING SITE FOR RESIDUE IOD A 1104
09
AC9
SOFTWARE
HOH B:2863
BINDING SITE FOR RESIDUE IOD B 1105
10
BC1
SOFTWARE
PHE A:295 , CHH A:1602
BINDING SITE FOR RESIDUE IOD A 1106
11
BC2
SOFTWARE
PRO B:28 , HOH B:2868
BINDING SITE FOR RESIDUE IOD B 1107
12
BC3
SOFTWARE
PRO A:28
BINDING SITE FOR RESIDUE IOD A 1108
13
BC4
SOFTWARE
LYS B:53
BINDING SITE FOR RESIDUE IOD B 1109
14
BC5
SOFTWARE
ARG B:245 , HOH B:2865
BINDING SITE FOR RESIDUE IOD B 1112
15
BC6
SOFTWARE
GLU B:351 , SER B:352
BINDING SITE FOR RESIDUE IOD B 1113
16
BC7
SOFTWARE
PHE B:295 , CHH B:2602
BINDING SITE FOR RESIDUE IOD B 1114
17
BC8
SOFTWARE
TRP A:86 , GLY A:120 , GLY A:121 , GLY A:122 , SER A:203 , ALA A:204 , PHE A:297 , HIS A:447
BINDING SITE FOR RESIDUE NWA A 601
18
BC9
SOFTWARE
TYR A:72 , ASP A:74 , TYR A:124 , TRP A:286 , TYR A:341 , IOD A:1106 , HOH A:1641 , HOH A:1820
BINDING SITE FOR RESIDUE CHH A 1602
19
CC1
SOFTWARE
TRP B:86 , GLY B:121 , GLY B:122 , GLU B:202 , SER B:203 , ALA B:204 , PHE B:297 , HIS B:447
BINDING SITE FOR RESIDUE NWA B 601
20
CC2
SOFTWARE
TYR B:72 , TYR B:124 , TRP B:286 , TYR B:341 , IOD B:1114 , HOH B:2699 , HOH B:2877
BINDING SITE FOR RESIDUE CHH B 2602
21
CC3
SOFTWARE
LEU A:380 , HIS A:381 , GLN A:527 , PHE A:535 , ALA B:377 , LEU B:380 , HIS B:381 , GLN B:527 , PHE B:535
BINDING SITE FOR RESIDUE P6G A 901
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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]
PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: CARBOXYLESTERASE_B_2 (A:94-104,B:94-104)
2: CARBOXYLESTERASE_B_1 (A:190-205,B:190-205)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CARBOXYLESTERASE_B_2
PS00941
Carboxylesterases type-B signature 2.
ACES_MOUSE
125-135
2
A:94-104
B:94-104
2
CARBOXYLESTERASE_B_1
PS00122
Carboxylesterases type-B serine active site.
ACES_MOUSE
221-236
2
A:190-205
B:190-205
[
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]
Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2ha0a_ (A:)
1b: SCOP_d2ha0b_ (B:)
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(
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Superfamilies
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(
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Families
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
alpha/beta-Hydrolases
(971)
Superfamily
:
alpha/beta-Hydrolases
(971)
Family
:
Acetylcholinesterase-like
(219)
Protein domain
:
automated matches
(91)
Mouse (Mus musculus) [TaxId: 10090]
(51)
1a
d2ha0a_
A:
1b
d2ha0b_
B:
[
close SCOP info
]
CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2ha0A00 (A:3-543)
1b: CATH_2ha0B00 (B:4-543)
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Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.1820, no name defined]
(692)
House mouse (Mus musculus)
(27)
1a
2ha0A00
A:3-543
1b
2ha0B00
B:4-543
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
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Label:
Sorry, no Info available
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Atom Selection
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Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
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Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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show SS bonds with a radius of 100 units (=0.4Å)
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Asym.Unit (193 KB)
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