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2H8M
Asym. Unit
Info
Asym.Unit (88 KB)
Biol.Unit 1 (42 KB)
Biol.Unit 2 (42 KB)
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(1)
Title
:
N-DOMAIN OF GRP94 IN COMPLEX WITH THE 2-IODO-NECA
Authors
:
R. M. Immormino, D. T. Gewirth
Date
:
07 Jun 06 (Deposition) - 24 Apr 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Grp94, Hsp82, Hsp90, Htpg, Chaperone, Ligand, Neca, Npca, Adenosine
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. M. Immormino, D. T. Gewirth
N-Domain Of Grp94 In Complex With The 2-Iodo-Neca
To Be Published
(for further references see the
PDB file header
)
[
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Hetero Components
(3, 13)
Info
All Hetero Components
1a: PENTAETHYLENE GLYCOL (1PEa)
1b: PENTAETHYLENE GLYCOL (1PEb)
2a: (2S,3S,4R,5R)-5-(6-AMINO-2-IODO-9H... (NEIa)
2b: (2S,3S,4R,5R)-5-(6-AMINO-2-IODO-9H... (NEIb)
3a: TETRAETHYLENE GLYCOL (PG4a)
3b: TETRAETHYLENE GLYCOL (PG4b)
3c: TETRAETHYLENE GLYCOL (PG4c)
3d: TETRAETHYLENE GLYCOL (PG4d)
3e: TETRAETHYLENE GLYCOL (PG4e)
3f: TETRAETHYLENE GLYCOL (PG4f)
3g: TETRAETHYLENE GLYCOL (PG4g)
3h: TETRAETHYLENE GLYCOL (PG4h)
3i: TETRAETHYLENE GLYCOL (PG4i)
View:
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Label:
No.
Name
Count
Type
Full Name
1
1PE
2
Ligand/Ion
PENTAETHYLENE GLYCOL
2
NEI
2
Ligand/Ion
(2S,3S,4R,5R)-5-(6-AMINO-2-IODO-9H-PURIN-9-YL)-N-ETHYL-3,4-DIHYDROXYTETRAHYDROFURAN-2-CARBOXAMIDE
3
PG4
9
Ligand/Ion
TETRAETHYLENE GLYCOL
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ALA A:111 , ASP A:149 , VAL A:152 , GLY A:153 , MET A:154 , ASN A:162 , LEU A:163 , PHE A:199 , HOH A:522 , HOH A:524 , HOH A:631 , HOH A:689
BINDING SITE FOR RESIDUE NEI A 401
02
AC2
SOFTWARE
ALA B:111 , ASP B:149 , VAL B:152 , GLY B:153 , MET B:154 , ASN B:162 , LEU B:163 , PHE B:199 , HOH B:604 , HOH B:605 , HOH B:607 , HOH B:608 , HOH B:693 , HOH B:699
BINDING SITE FOR RESIDUE NEI B 402
03
AC3
SOFTWARE
THR B:212 , ARG B:237 , HOH B:675 , HOH B:720
BINDING SITE FOR RESIDUE PG4 B 501
04
AC4
SOFTWARE
LYS B:137 , HIS B:146 , THR B:148 , LEU B:241 , HOH B:708
BINDING SITE FOR RESIDUE PG4 B 502
05
AC5
SOFTWARE
THR A:212 , ARG A:237 , THR A:240 , THR A:248 , HOH A:534 , HOH A:554 , HOH A:585 , HOH A:651 , HOH A:686
BINDING SITE FOR RESIDUE PG4 A 504
06
AC6
SOFTWARE
LYS A:137 , HIS A:146 , TRP A:282 , HOH A:590 , HOH A:597
BINDING SITE FOR RESIDUE PG4 A 505
07
AC7
SOFTWARE
ASN A:162 , HOH A:668
BINDING SITE FOR RESIDUE PG4 A 506
08
AC8
SOFTWARE
ASP A:110 , ASP A:113 , LYS A:114 , LEU A:117
BINDING SITE FOR RESIDUE PG4 A 507
09
AC9
SOFTWARE
ASN B:107 , ALA B:108 , ASP B:149
BINDING SITE FOR RESIDUE PG4 B 508
10
BC1
SOFTWARE
ASP B:110 , LYS B:114 , LEU B:117 , HOH B:711
BINDING SITE FOR RESIDUE PG4 B 509
11
BC2
SOFTWARE
THR A:263 , ASN A:266
BINDING SITE FOR RESIDUE PG4 A 510
12
BC3
SOFTWARE
ASN A:83 , LYS A:87 , ILE A:90 , SER A:227 , ASN B:83 , LYS B:87 , ILE B:90 , SER B:227
BINDING SITE FOR RESIDUE 1PE B 601
13
BC4
SOFTWARE
LYS A:75 , ALA A:77 , PHE A:78 , LYS B:75 , PHE B:76 , ALA B:77 , HOH B:724
BINDING SITE FOR RESIDUE 1PE B 602
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: HSP90 (A:94-103,B:94-103)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HSP90
PS00298
Heat shock hsp90 proteins family signature.
ENPL_CANLF
94-103
2
A:94-103
B:94-103
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2h8ma_ (A:)
1b: SCOP_d2h8mb_ (B:)
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Classes
(
)
(
)
Folds
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(
)
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)
(
)
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(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
(364)
Superfamily
:
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
(364)
Family
:
Heat shock protein 90, HSP90, N-terminal domain
(238)
Protein domain
:
HSP90
(126)
Dog (Canis familiaris) [TaxId: 9615]
(22)
1a
d2h8ma_
A:
1b
d2h8mb_
B:
[
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2h8mB00 (B:74-337)
1b: CATH_2h8mA00 (A:74-337)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Heat Shock Protein 90
(209)
Homologous Superfamily
:
[code=3.30.565.10, no name defined]
(205)
Dog (Canis lupus familiaris)
(22)
1a
2h8mB00
B:74-337
1b
2h8mA00
A:74-337
[
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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select chains 'A' and 'C'
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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show SS bonds with a radius of 100 units (=0.4Å)
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Show PDB file:
Asym.Unit (88 KB)
Header - Asym.Unit
Biol.Unit 1 (42 KB)
Header - Biol.Unit 1
Biol.Unit 2 (42 KB)
Header - Biol.Unit 2
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