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2H8K
Asym. Unit
Info
Asym.Unit (80 KB)
Biol.Unit 1 (74 KB)
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(1)
Title
:
HUMAN SULFOTRANFERASE SULT1C3 IN COMPLEX WITH PAP
Authors
:
W. Tempel, L. Dombrovski, P. Loppnau, J. Weigelt, M. Sundstrom, C. H. Arrowsmith, A. M. Edwards, A. Bochkarev, A. N. Plotnikov, Structural Genomics Consortium (Sgc)
Date
:
07 Jun 06 (Deposition) - 20 Jun 06 (Release) - 09 Dec 08 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Sulfotransferase, Sulfate Conjugation, Pap, Structural Genomics, Structural Genomics Consortium, Sgc
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Allali-Hassani, P. W. Pan, L. Dombrovski, R. Najmanovich, W. Tempel, A. Dong, P. Loppnau, F. Martin, J. Thornton, J. Thonton, A. M. Edwards, A. Bochkarev, A. N. Plotnikov, M. Vedadi, C. H. Arrowsmith
Structural And Chemical Profiling Of The Human Cytosolic Sulfotransferases.
Plos Biol. V. 5 E97 2007
(for further references see the
PDB file header
)
[
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: ADENOSINE-3'-5'-DIPHOSPHATE (A3Pa)
1b: ADENOSINE-3'-5'-DIPHOSPHATE (A3Pb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
A3P
2
Ligand/Ion
ADENOSINE-3'-5'-DIPHOSPHATE
[
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]
Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LYS A:56 , SER A:57 , GLY A:58 , THR A:59 , THR A:60 , TRP A:61 , ARG A:139 , SER A:147 , TYR A:202 , THR A:236 , SER A:237 , PHE A:238 , MET A:241 , ARG A:266 , LYS A:267 , GLY A:268
BINDING SITE FOR RESIDUE A3P A 401
2
AC2
SOFTWARE
LYS B:56 , SER B:57 , GLY B:58 , THR B:59 , THR B:60 , TRP B:61 , ARG B:139 , SER B:147 , TYR B:202 , THR B:236 , SER B:237 , PHE B:238 , MET B:241 , ARG B:266 , LYS B:267 , GLY B:268
BINDING SITE FOR RESIDUE A3P B 401
[
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SAPs(SNPs)/Variants
(3, 6)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_033732 (Y148C, chain A/B, )
2: VAR_033733 (G179R, chain A/B, )
3: VAR_033734 (M194T, chain A/B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_033732
Y
148
C
ST1C3_HUMAN
Polymorphism
17035911
A/B
Y
148
C
2
UniProt
VAR_033733
G
179
R
ST1C3_HUMAN
Polymorphism
2219078
A/B
G
179
R
3
UniProt
VAR_033734
M
194
T
ST1C3_HUMAN
Polymorphism
6722745
A/B
M
194
T
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
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Exons
(7, 14)
Info
All Exons
Exon 1.1 (A:18-58 | B:18-58)
Exon 1.2 (A:58-71 | B:58-71)
Exon 1.3 (A:112-133 | B:112-133)
Exon 1.4 (A:134-176 | B:134-176)
Exon 1.5 (A:176-207 | B:176-207)
Exon 1.8 (A:208-268 | B:208-268)
Exon 1.9 (A:268-302 | B:268-302)
View:
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/1.3
4: Boundary 1.3/1.4
5: Boundary 1.4/1.5
6: Boundary 1.5/1.8
7: Boundary 1.8/1.9
8: Boundary 1.9/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000329106
1
ENSE00001555501
chr2:
108863651-108863822
172
ST1C3_HUMAN
1-58
58
2
A:18-58
B:18-58
41
41
1.2
ENST00000329106
2
ENSE00001323839
chr2:
108868821-108868949
129
ST1C3_HUMAN
58-101
44
2
A:58-71
B:58-71
14
14
1.3
ENST00000329106
3
ENSE00001302138
chr2:
108869801-108869898
98
ST1C3_HUMAN
101-133
33
2
A:112-133
B:112-133
22
22
1.4
ENST00000329106
4
ENSE00001292358
chr2:
108872028-108872154
127
ST1C3_HUMAN
134-176
43
2
A:134-176
B:134-176
43
43
1.5
ENST00000329106
5
ENSE00001311706
chr2:
108875190-108875284
95
ST1C3_HUMAN
176-207
32
2
A:176-207
B:176-207
32
32
1.8
ENST00000329106
8
ENSE00001312136
chr2:
108881281-108881461
181
ST1C3_HUMAN
208-268
61
2
A:208-268
B:208-268
61
61
1.9
ENST00000329106
9
ENSE00001292700
chr2:
108881695-108881807
113
ST1C3_HUMAN
268-304
37
2
A:268-302
B:268-302
35
35
[
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SCOP Domains
(0, 0)
Info
All SCOP Domains
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2h8kA00 (A:18-302)
1b: CATH_2h8kB00 (B:18-302)
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Organisms
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(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Human (Homo sapiens)
(413)
1a
2h8kA00
A:18-302
1b
2h8kB00
B:18-302
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Asymmetric Unit 1
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