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2H5Y
Biol. Unit 1
Info
Asym.Unit (126 KB)
Biol.Unit 1 (43 KB)
Biol.Unit 2 (43 KB)
Biol.Unit 3 (41 KB)
Biol.Unit 4 (162 KB)
Biol.Unit 5 (79 KB)
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(1)
Title
:
CRYSTALLOGRAPHIC STRUCTURE OF THE MOLYBDATE-BINDING PROTEIN OF XANTHOMONAS CITRI AT 1.7 ANG RESOLUTION BOUND TO MOLYBDATE
Authors
:
A. Balan, C. P. Santacruz, L. C. S. Ferreira, J. A. R. G. Barbosa
Date
:
29 May 06 (Deposition) - 05 Jun 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: A,B (2x)
Biol. Unit 5: C (2x)
Keywords
:
Molybdate-Binding Protein, Moda, Xanthomonas Axonopodis Pv. Citri, Metal Transport
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
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Reference
:
C. P. Santacruz, A. Balan, L. C. Ferreira, J. A. R. G. Barbosa
Crystallization, Data Collection And Phasing Of The Molybdate-Binding Protein Of The Phytopathogen Xanthomonas Axonopodis Pv. Citri
Acta Crystallogr. , Sect. F V. 62 289 2006
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: MOLYBDATE ION (MOOa)
1b: MOLYBDATE ION (MOOb)
1c: MOLYBDATE ION (MOOc)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
2d: SULFATE ION (SO4d)
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No.
Name
Count
Type
Full Name
1
MOO
1
Ligand/Ion
MOLYBDATE ION
2
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(3, 3)
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All Sites
1: AC2 (SOFTWARE)
2: AC4 (SOFTWARE)
3: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
MET A:157 , SER A:160 , ARG A:161 , LYS A:179 , HOH A:1457 , HOH A:1695 , ARG B:227
BINDING SITE FOR RESIDUE SO4 A 1401
2
AC4
SOFTWARE
THR A:120 , ALA A:121 , ARG A:134 , HOH A:1430 , HOH A:1598
BINDING SITE FOR RESIDUE SO4 A 1403
3
AC5
SOFTWARE
ALA A:10 , ALA A:11 , SER A:12 , ALA A:38 , SER A:39 , ALA A:58 , VAL A:123 , PRO A:124 , ALA A:125 , SER A:151 , VAL A:152 , TYR A:170
BINDING SITE FOR RESIDUE MOO A 1300
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d2h5ya_ (A:)
1b: SCOP_d2h5yb_ (B:)
1c: SCOP_d2h5yc_ (C:)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Periplasmic binding protein-like II
(813)
Superfamily
:
Periplasmic binding protein-like II
(813)
Family
:
automated matches
(267)
Protein domain
:
automated matches
(267)
Xanthomonas axonopodis [TaxId: 190486]
(1)
1a
d2h5ya_
A:
1b
d2h5yb_
B:
1c
d2h5yc_
C:
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CATH Domains
(1, 6)
Info
all CATH domains
1a: CATH_2h5yB01 (B:1-82,B:195-233)
1b: CATH_2h5yA01 (A:2-82,A:195-233)
1c: CATH_2h5yC01 (C:2-82,C:195-233)
1d: CATH_2h5yA02 (A:83-194)
1e: CATH_2h5yB02 (B:83-194)
1f: CATH_2h5yC02 (C:83-194)
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
D-Maltodextrin-Binding Protein; domain 2
(600)
Homologous Superfamily
:
Periplasmic binding protein-like II
(486)
Citri str (Xanthomonas axonopodis pv)
(1)
1a
2h5yB01
B:1-82,B:195-233
1b
2h5yA01
A:2-82,A:195-233
1c
2h5yC01
C:2-82,C:195-233
1d
2h5yA02
A:83-194
1e
2h5yB02
B:83-194
1f
2h5yC02
C:83-194
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Pfam Domains
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (126 KB)
Header - Asym.Unit
Biol.Unit 1 (43 KB)
Header - Biol.Unit 1
Biol.Unit 2 (43 KB)
Header - Biol.Unit 2
Biol.Unit 3 (41 KB)
Header - Biol.Unit 3
Biol.Unit 4 (162 KB)
Header - Biol.Unit 4
Biol.Unit 5 (79 KB)
Header - Biol.Unit 5
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