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2GYP
Asym. Unit
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Asym.Unit (17 KB)
Biol.Unit 1 (9 KB)
Biol.Unit 2 (9 KB)
Biol.Unit 3 (24 KB)
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(1)
Title
:
DIABETES MELLITUS DUE TO A FRUSTRATED SCHELLMAN MOTIF IN HNF-1A
Authors
:
N. Narayana, N. B. Phillips, Q. X. Hua, W. Jia, M. A. Weiss
Date
:
09 May 06 (Deposition) - 20 Mar 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.40
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (2x)
Biol. Unit 2: B (2x)
Biol. Unit 3: A,B (2x)
Keywords
:
Energy Landscape, Gene Regulation, Protein Engineering, Protein Stability, Protein Structure, Transcription Regulator
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. Narayana, N. B. Phillips, Q. X. Hua, W. Jia, M. A. Weiss
Diabetes Mellitus Due To Misfolding Of A Beta-Cell Transcription Factor: Stereospecific Frustration Of A Schellman Motif In Hnf-1Alpha.
J. Mol. Biol. V. 362 414 2006
(for further references see the
PDB file header
)
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: D-ALANINE (DALa)
1b: D-ALANINE (DALb)
2a: NORLEUCINE (NLEa)
2b: NORLEUCINE (NLEb)
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Select:
Label:
No.
Name
Count
Type
Full Name
1
DAL
2
Mod. Amino Acid
D-ALANINE
2
NLE
2
Mod. Amino Acid
NORLEUCINE
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Sites
(0, 0)
Info
All Sites
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Label:
Sorry, no Info available
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SAPs(SNPs)/Variants
(4, 8)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_010537 (L45H, chain A/B, )
2: VAR_012483 (A53R, chain A/B, )
3: VAR_007905 (I60L, chain A/B, )
4: VAR_010538 (G64D, chain A/B, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_010537
L
12
H
HNF1A_HUMAN
Disease (MODY3)
---
A
B
L
12
45
H
2
UniProt
VAR_012483
G
20
R
HNF1A_HUMAN
Disease (MODY3)
---
A
B
A
20
53
R
3
UniProt
VAR_007905
I
27
L
HNF1A_HUMAN
Polymorphism
1169288
A
B
I
27
60
L
4
UniProt
VAR_010538
G
31
D
HNF1A_HUMAN
Disease (MODY3)
---
A
B
G
31
64
D
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
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All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
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Exons
(1, 2)
Info
All Exons
Exon 1.1a (A:1-33 | B:34-66)
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All Exon Boundaries
1: Boundary -/1.1a
2: Boundary 1.1a/1.2
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000257555
1a
ENSE00001893688
chr12:
121416346-121416897
552
HNF1A_HUMAN
1-109
109
2
A:1-33
B:34-66
33
33
1.2
ENST00000257555
2
ENSE00000756493
chr12:
121426636-121426835
200
HNF1A_HUMAN
109-176
68
0
-
-
1.3
ENST00000257555
3
ENSE00000756490
chr12:
121431323-121431509
187
HNF1A_HUMAN
176-238
63
0
-
-
1.4
ENST00000257555
4
ENSE00000564735
chr12:
121431967-121432208
242
HNF1A_HUMAN
238-319
82
0
-
-
1.5
ENST00000257555
5
ENSE00000756487
chr12:
121434065-121434216
152
HNF1A_HUMAN
319-369
51
0
-
-
1.6a
ENST00000257555
6a
ENSE00000940088
chr12:
121434344-121434545
202
HNF1A_HUMAN
370-437
68
0
-
-
1.6e
ENST00000257555
6e
ENSE00000756464
chr12:
121435277-121435468
192
HNF1A_HUMAN
437-501
65
0
-
-
1.7
ENST00000257555
7
ENSE00000756456
chr12:
121437071-121437192
122
HNF1A_HUMAN
501-541
41
0
-
-
1.8
ENST00000257555
8
ENSE00000756450
chr12:
121437286-121437430
145
HNF1A_HUMAN
542-590
49
0
-
-
1.9a
ENST00000257555
9a
ENSE00000835338
chr12:
121438868-121440899
2032
HNF1A_HUMAN
590-631
42
0
-
-
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SCOP Domains
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Pfam Domains
(0, 0)
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Show PDB file:
Asym.Unit (17 KB)
Header - Asym.Unit
Biol.Unit 1 (9 KB)
Header - Biol.Unit 1
Biol.Unit 2 (9 KB)
Header - Biol.Unit 2
Biol.Unit 3 (24 KB)
Header - Biol.Unit 3
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