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2GWO
Biol. Unit 1
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Asym.Unit (118 KB)
Biol.Unit 1 (30 KB)
Biol.Unit 2 (30 KB)
Biol.Unit 3 (31 KB)
Biol.Unit 4 (31 KB)
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Title
:
CRYSTAL STRUCTURE OF TMDP
Authors
:
S. J. Kim, S. E. Ryu, J. H. Kim
Date
:
05 May 06 (Deposition) - 20 Mar 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Alpha/Beta, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. J. Kim, D. G. Jeong, T. S. Yoon, J. H. Son, S. K. Cho, S. E. Ryu, J. H. Kim
Crystal Structure Of Human Tmdp, A Testis-Specific Dual Specificity Protein Phosphatase: Implications For Substrate Specificity
Proteins V. 66 239 2007
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_057130 (R62Q, chain A, )
2: VAR_025431 (C156Y, chain A, )
3: VAR_057131 (R190G, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_057130
R
62
Q
DS13B_HUMAN
Polymorphism
16932004
A
R
62
Q
2
UniProt
VAR_025431
C
156
Y
DS13B_HUMAN
Polymorphism
3088142
A
C
156
Y
3
UniProt
VAR_057131
R
190
G
DS13B_HUMAN
Polymorphism
16931996
A
R
190
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: TYR_PHOSPHATASE_DUAL (A:45-192)
2: TYR_PHOSPHATASE_2 (A:114-172)
3: TYR_PHOSPHATASE_1 (A:136-146)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TYR_PHOSPHATASE_DUAL
PS50054
Dual specificity protein phosphatase family profile.
DS13B_HUMAN
45-192
1
A:45-192
-
-
-
2
TYR_PHOSPHATASE_2
PS50056
Tyrosine specific protein phosphatases family profile.
DS13B_HUMAN
114-172
1
A:114-172
-
-
-
3
TYR_PHOSPHATASE_1
PS00383
Tyrosine specific protein phosphatases active site.
DS13B_HUMAN
136-146
1
A:136-146
-
-
-
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Exons
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SCOP Domains
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_2gwoC00 (C:25-198)
1b: CATH_2gwoD00 (D:25-198)
1c: CATH_2gwoA00 (A:25-193)
1d: CATH_2gwoB00 (B:25-193)
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Organisms
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)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Protein-Tyrosine Phosphatase; Chain A
(262)
Homologous Superfamily
:
Protein tyrosine phosphatase superfamily
(228)
Human (Homo sapiens)
(196)
1a
2gwoC00
C:25-198
1b
2gwoD00
D:25-198
1c
2gwoA00
A:25-193
1d
2gwoB00
B:25-193
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Pfam Domains
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (118 KB)
Header - Asym.Unit
Biol.Unit 1 (30 KB)
Header - Biol.Unit 1
Biol.Unit 2 (30 KB)
Header - Biol.Unit 2
Biol.Unit 3 (31 KB)
Header - Biol.Unit 3
Biol.Unit 4 (31 KB)
Header - Biol.Unit 4
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