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2GVT
Theor. Model
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Theoretical Model (155 KB)
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(1)
Title
:
MODEL OF HUMAN (ALPHA4)2-(BETA2)3 NICOTINIC RECEPTOR
Authors
:
R. Artali, G. Bombieri, A. Del Pra, N. Marchini, F. Meneghetti
Date
:
03 May 06 (Deposition) - 15 May 07 (Release) - 15 May 07 (Revision)
Method
:
THEORETICAL MODEL
Resolution
:
NOT APPLICABLE
Chains
:
Theor. Model : A,B,C,D,E
Keywords
:
Human, Nicotinic Receptor, Alpha4-Beta2
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. Artali, G. Bombieri, A. Del Pra, N. Marchini, F. Meneghetti
Model Of Human (Alpha4)2-(Beta2)3 Nicotinic Receptor
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 5)
Info
All PROSITE Patterns/Profiles
1: NEUROTR_ION_CHANNEL (B:155-169,D:155-169,E:155-169,A:16...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
NEUROTR_ION_CHANNEL
PS00236
Neurotransmitter-gated ion-channels signature.
ACHB2_HUMAN
155-169
3
B:155-169
D:155-169
E:155-169
ACHA4_HUMAN
161-175
2
A:161-175
C:161-175
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Exons
(8, 20)
Info
All Exons
Exon 1.2 (B:30-70 | D:30-70 | E:30-70)
Exon 1.3 (B:71-85 | D:71-85 | E:71-85)
Exon 1.4 (B:86-122 | D:86-122 | E:86-122)
Exon 1.5 (B:122-233 | D:122-233 | E:122-233)
Exon 2.7 (A:38-76 | C:38-76)
Exon 2.8 (A:77-91 | C:77-91)
Exon 2.9a (A:92-128 | C:92-128)
Exon 2.11 (A:128-241 | C:128-241)
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All Exon Boundaries
01: Boundary 1.1/1.2
02: Boundary 1.2/1.3
03: Boundary 1.3/1.4
04: Boundary 1.4/1.5
05: Boundary 1.5/1.6
06: Boundary 2.6a/2.7
07: Boundary 2.7/2.8
08: Boundary 2.8/2.9a
09: Boundary 2.9a/2.11
10: Boundary 2.11/2.12c
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000368476
1
ENSE00001447218
chr1:
154540257-154540584
328
ACHB2_HUMAN
1-22
22
0
-
-
1.2
ENST00000368476
2
ENSE00001053945
chr1:
154541938-154542083
146
ACHB2_HUMAN
22-70
49
3
B:30-70
D:30-70
E:30-70
41
41
41
1.3
ENST00000368476
3
ENSE00001053946
chr1:
154542268-154542312
45
ACHB2_HUMAN
71-85
15
3
B:71-85
D:71-85
E:71-85
15
15
15
1.4
ENST00000368476
4
ENSE00001053948
chr1:
154542734-154542843
110
ACHB2_HUMAN
86-122
37
3
B:86-122
D:86-122
E:86-122
37
37
37
1.5
ENST00000368476
5
ENSE00001053947
chr1:
154543665-154544637
973
ACHB2_HUMAN
122-446
325
3
B:122-233
D:122-233
E:122-233
112
112
112
1.6
ENST00000368476
6
ENSE00001447217
chr1:
154548238-154552502
4265
ACHB2_HUMAN
447-502
56
0
-
-
2.6a
ENST00000370263
6a
ENSE00001922679
chr20:
61992739-61992442
298
ACHA4_HUMAN
1-26
26
0
-
-
2.7
ENST00000370263
7
ENSE00001629608
chr20:
61991051-61990900
152
ACHA4_HUMAN
26-76
51
2
A:38-76
C:38-76
39
39
2.8
ENST00000370263
8
ENSE00001714205
chr20:
61987767-61987723
45
ACHA4_HUMAN
77-91
15
2
A:77-91
C:77-91
15
15
2.9a
ENST00000370263
9a
ENSE00001604860
chr20:
61987436-61987327
110
ACHA4_HUMAN
92-128
37
2
A:92-128
C:92-128
37
37
2.11
ENST00000370263
11
ENSE00000593427
chr20:
61982379-61981005
1375
ACHA4_HUMAN
128-586
459
2
A:128-241
C:128-241
114
114
2.12c
ENST00000370263
12c
ENSE00001900127
chr20:
61978215-61975420
2796
ACHA4_HUMAN
587-627
41
0
-
-
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