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2GVM
Biol. Unit 1
Info
Asym.Unit (53 KB)
Biol.Unit 1 (92 KB)
Biol.Unit 2 (92 KB)
Biol.Unit 3 (92 KB)
Biol.Unit 4 (14 KB)
Biol.Unit 5 (14 KB)
Biol.Unit 6 (13 KB)
Biol.Unit 7 (12 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HYDROPHOBIN HFBI WITH DETERGENT
Authors
:
J. M. Hakanpaa, J. Rouvinen
Date
:
03 May 06 (Deposition) - 15 Aug 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (2x)
Biol. Unit 2: A,B,C,D (2x)
Biol. Unit 3: A,B,C,D (2x)
Biol. Unit 4: A (1x)
Biol. Unit 5: B (1x)
Biol. Unit 6: C (1x)
Biol. Unit 7: D (1x)
Keywords
:
Hydrophobin, Amphiphile, Surfactant, High Solvent Content, Surface Active Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. M. Hakanpaa, G. R. Szilvay, H. Kaljunen, M. Maksimainen, M. Linder, J. Rouvinen
Two Crystal Structures Of Trichoderma Reesei Hydrophobin Hfbi--The Structure Of A Protein Amphiphile With And Withou Detergent Interaction.
Protein Sci. V. 15 2129 2006
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Hetero Components
(1, 20)
Info
All Hetero Components
1a: LAURYL DIMETHYLAMINE-N-OXIDE (LDAa)
1b: LAURYL DIMETHYLAMINE-N-OXIDE (LDAb)
1c: LAURYL DIMETHYLAMINE-N-OXIDE (LDAc)
1d: LAURYL DIMETHYLAMINE-N-OXIDE (LDAd)
1e: LAURYL DIMETHYLAMINE-N-OXIDE (LDAe)
1f: LAURYL DIMETHYLAMINE-N-OXIDE (LDAf)
1g: LAURYL DIMETHYLAMINE-N-OXIDE (LDAg)
1h: LAURYL DIMETHYLAMINE-N-OXIDE (LDAh)
1i: LAURYL DIMETHYLAMINE-N-OXIDE (LDAi)
1j: LAURYL DIMETHYLAMINE-N-OXIDE (LDAj)
2a: ZINC ION (ZNa)
2b: ZINC ION (ZNb)
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Label:
No.
Name
Count
Type
Full Name
1
LDA
20
Ligand/Ion
LAURYL DIMETHYLAMINE-N-OXIDE
2
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:43 , HOH A:305 , ASP D:40 , ASP D:43
BINDING SITE FOR RESIDUE ZN A 201
02
AC2
SOFTWARE
ASP B:40 , ASP B:43 , HOH B:328 , GLN C:36 , ASP C:43
BINDING SITE FOR RESIDUE ZN B 202
03
AC3
SOFTWARE
LEU B:12 , PHE B:13 , LDA C:310
BINDING SITE FOR RESIDUE LDA B 302
04
AC4
SOFTWARE
ILE A:27 , LDA C:310
BINDING SITE FOR RESIDUE LDA A 303
05
AC5
SOFTWARE
LDA B:305 , LDA B:306
BINDING SITE FOR RESIDUE LDA A 304
06
AC6
SOFTWARE
LDA A:304 , LDA B:308
BINDING SITE FOR RESIDUE LDA B 305
07
AC7
SOFTWARE
LDA A:304
BINDING SITE FOR RESIDUE LDA B 306
08
AC8
SOFTWARE
THR B:21 , GLN B:22 , VAL B:23 , LEU B:29 , LDA B:309 , LEU C:24
BINDING SITE FOR RESIDUE LDA B 307
09
AC9
SOFTWARE
ALA A:66 , ASP B:30 , LDA B:305 , HOH B:324 , VAL C:23
BINDING SITE FOR RESIDUE LDA B 308
10
BC1
SOFTWARE
LDA B:307
BINDING SITE FOR RESIDUE LDA B 309
11
BC2
SOFTWARE
LDA A:303 , LDA B:302 , GLN C:65 , VAL D:23
BINDING SITE FOR RESIDUE LDA C 310
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d2gvma_ (A:)
1b: SCOP_d2gvmb_ (B:)
1c: SCOP_d2gvmc_ (C:)
1d: SCOP_d2gvmd_ (D:)
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Protein Domains
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Organisms
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Class
:
All beta proteins
(24004)
Fold
:
Hydrophobin II, HfbII
(7)
Superfamily
:
Hydrophobin II, HfbII
(7)
Family
:
Hydrophobin II, HfbII
(7)
Protein domain
:
automated matches
(2)
Hypocrea jecorina [TaxId: 51453]
(2)
1a
d2gvma_
A:
1b
d2gvmb_
B:
1c
d2gvmc_
C:
1d
d2gvmd_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_2gvmA00 (A:6-75)
1b: CATH_2gvmB00 (B:6-75)
1c: CATH_2gvmC00 (C:6-75)
1d: CATH_2gvmD00 (D:6-75)
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(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
hfbii hydrophobin
(6)
Homologous Superfamily
:
hfbii hydrophobin
(6)
Hypocrea jecorina. Organism_taxid: 51453
(5)
1a
2gvmA00
A:6-75
1b
2gvmB00
B:6-75
1c
2gvmC00
C:6-75
1d
2gvmD00
D:6-75
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Pfam Domains
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Show PDB file:
Asym.Unit (53 KB)
Header - Asym.Unit
Biol.Unit 1 (92 KB)
Header - Biol.Unit 1
Biol.Unit 2 (92 KB)
Header - Biol.Unit 2
Biol.Unit 3 (92 KB)
Header - Biol.Unit 3
Biol.Unit 4 (14 KB)
Header - Biol.Unit 4
Biol.Unit 5 (14 KB)
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Biol.Unit 6 (13 KB)
Header - Biol.Unit 6
Biol.Unit 7 (12 KB)
Header - Biol.Unit 7
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