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2GVM
Asym. Unit
Info
Asym.Unit (53 KB)
Biol.Unit 1 (92 KB)
Biol.Unit 2 (92 KB)
Biol.Unit 3 (92 KB)
Biol.Unit 4 (14 KB)
Biol.Unit 5 (14 KB)
Biol.Unit 6 (13 KB)
Biol.Unit 7 (12 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HYDROPHOBIN HFBI WITH DETERGENT
Authors
:
J. M. Hakanpaa, J. Rouvinen
Date
:
03 May 06 (Deposition) - 15 Aug 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (2x)
Biol. Unit 2: A,B,C,D (2x)
Biol. Unit 3: A,B,C,D (2x)
Biol. Unit 4: A (1x)
Biol. Unit 5: B (1x)
Biol. Unit 6: C (1x)
Biol. Unit 7: D (1x)
Keywords
:
Hydrophobin, Amphiphile, Surfactant, High Solvent Content, Surface Active Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. M. Hakanpaa, G. R. Szilvay, H. Kaljunen, M. Maksimainen, M. Linder, J. Rouvinen
Two Crystal Structures Of Trichoderma Reesei Hydrophobin Hfbi--The Structure Of A Protein Amphiphile With And Withou Detergent Interaction.
Protein Sci. V. 15 2129 2006
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Hetero Components
(2, 12)
Info
All Hetero Components
1a: LAURYL DIMETHYLAMINE-N-OXIDE (LDAa)
1b: LAURYL DIMETHYLAMINE-N-OXIDE (LDAb)
1c: LAURYL DIMETHYLAMINE-N-OXIDE (LDAc)
1d: LAURYL DIMETHYLAMINE-N-OXIDE (LDAd)
1e: LAURYL DIMETHYLAMINE-N-OXIDE (LDAe)
1f: LAURYL DIMETHYLAMINE-N-OXIDE (LDAf)
1g: LAURYL DIMETHYLAMINE-N-OXIDE (LDAg)
1h: LAURYL DIMETHYLAMINE-N-OXIDE (LDAh)
1i: LAURYL DIMETHYLAMINE-N-OXIDE (LDAi)
1j: LAURYL DIMETHYLAMINE-N-OXIDE (LDAj)
2a: ZINC ION (ZNa)
2b: ZINC ION (ZNb)
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Label:
No.
Name
Count
Type
Full Name
1
LDA
10
Ligand/Ion
LAURYL DIMETHYLAMINE-N-OXIDE
2
ZN
2
Ligand/Ion
ZINC ION
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:43 , HOH A:305 , ASP D:40 , ASP D:43
BINDING SITE FOR RESIDUE ZN A 201
02
AC2
SOFTWARE
ASP B:40 , ASP B:43 , HOH B:328 , GLN C:36 , ASP C:43
BINDING SITE FOR RESIDUE ZN B 202
03
AC3
SOFTWARE
LEU B:12 , PHE B:13 , LDA C:310
BINDING SITE FOR RESIDUE LDA B 302
04
AC4
SOFTWARE
ILE A:27 , LDA C:310
BINDING SITE FOR RESIDUE LDA A 303
05
AC5
SOFTWARE
LDA B:305 , LDA B:306
BINDING SITE FOR RESIDUE LDA A 304
06
AC6
SOFTWARE
LDA A:304 , LDA B:308
BINDING SITE FOR RESIDUE LDA B 305
07
AC7
SOFTWARE
LDA A:304
BINDING SITE FOR RESIDUE LDA B 306
08
AC8
SOFTWARE
THR B:21 , GLN B:22 , VAL B:23 , LEU B:29 , LDA B:309 , LEU C:24
BINDING SITE FOR RESIDUE LDA B 307
09
AC9
SOFTWARE
ALA A:66 , ASP B:30 , LDA B:305 , HOH B:324 , VAL C:23
BINDING SITE FOR RESIDUE LDA B 308
10
BC1
SOFTWARE
LDA B:307
BINDING SITE FOR RESIDUE LDA B 309
11
BC2
SOFTWARE
LDA A:303 , LDA B:302 , GLN C:65 , VAL D:23
BINDING SITE FOR RESIDUE LDA C 310
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d2gvma_ (A:)
1b: SCOP_d2gvmb_ (B:)
1c: SCOP_d2gvmc_ (C:)
1d: SCOP_d2gvmd_ (D:)
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Protein Domains
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Organisms
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(
)
Class
:
All beta proteins
(24004)
Fold
:
Hydrophobin II, HfbII
(7)
Superfamily
:
Hydrophobin II, HfbII
(7)
Family
:
Hydrophobin II, HfbII
(7)
Protein domain
:
automated matches
(2)
Hypocrea jecorina [TaxId: 51453]
(2)
1a
d2gvma_
A:
1b
d2gvmb_
B:
1c
d2gvmc_
C:
1d
d2gvmd_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_2gvmA00 (A:6-75)
1b: CATH_2gvmB00 (B:6-75)
1c: CATH_2gvmC00 (C:6-75)
1d: CATH_2gvmD00 (D:6-75)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
hfbii hydrophobin
(6)
Homologous Superfamily
:
hfbii hydrophobin
(6)
Hypocrea jecorina. Organism_taxid: 51453
(5)
1a
2gvmA00
A:6-75
1b
2gvmB00
B:6-75
1c
2gvmC00
C:6-75
1d
2gvmD00
D:6-75
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Pfam Domains
(0, 0)
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all PFAM domains
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Asymmetric Unit 1
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Asym.Unit (53 KB)
Header - Asym.Unit
Biol.Unit 1 (92 KB)
Header - Biol.Unit 1
Biol.Unit 2 (92 KB)
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Biol.Unit 3 (92 KB)
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Biol.Unit 4 (14 KB)
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Biol.Unit 5 (14 KB)
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