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2GSB
Asym. Unit
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Asym.Unit (621 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE SECOND SH2 DOMAIN OF HUMAN RAS GTPASE-ACTIVATING PROTEIN 1
Authors
:
C. Kurosaki, T. Suetake, M. Yoshida, F. Hayashi, S. Yokoyma, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
26 Apr 06 (Deposition) - 01 May 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Gtpase-Activating Protein, Gap, Ras P21 Protein Activator, P120Gap, Rasgap, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Kurosaki, T. Suetake, M. Yoshida, F. Hayashi, S. Yokoyma
Solution Structure Of The Second Sh2 Domain Of Human Ras Gtpase-Activating Protein 1
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
View:
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
View:
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Label:
Sorry, no Info available
[
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]
SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_002650 (R65L, chain A, )
2: VAR_002651 (K67E, chain A, )
3: VAR_002652 (I68V, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_002650
R
398
L
RASA1_HUMAN
Unclassified
---
A
R
65
L
2
UniProt
VAR_002651
K
400
E
RASA1_HUMAN
Unclassified
---
A
K
67
E
3
UniProt
VAR_002652
I
401
V
RASA1_HUMAN
Unclassified
---
A
I
68
V
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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]
PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: SH2 (-|A:18-108)
2: SH3 (A:7-8)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SH2
PS50001
Src homology 2 (SH2) domain profile.
RASA1_HUMAN
181-272
351-441
1
-
A:18-108
2
SH3
PS50002
Src homology 3 (SH3) domain profile.
RASA1_HUMAN
279-341
1
A:7-8
[
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Exons
(7, 7)
Info
All Exons
Exon 1.4 (A:1-4)
Exon 1.5b (A:5-6)
Exon 1.8 (A:7-17)
Exon 1.9 (A:17-35)
Exon 1.10b (A:35-85)
Exon 1.11 (A:85-111)
Exon 1.12 (A:112-119 (gaps))
View:
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All Exon Boundaries
1: Boundary 1.1a/1.4
2: Boundary 1.4/1.5b
3: Boundary 1.5b/1.6a
4: Boundary 1.7b/1.8
5: Boundary 1.8/1.9
6: Boundary 1.9/1.10b
7: Boundary 1.10b/1.11
8: Boundary 1.11/1.12
9: Boundary 1.12/1.13
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000274376
1a
ENSE00001505330
chr5:
86563705-86564807
1103
RASA1_HUMAN
1-180
180
0
-
-
1.4
ENST00000274376
4
ENSE00001162572
chr5:
86627165-86627317
153
RASA1_HUMAN
180-231
52
1
A:1-4
4
1.5b
ENST00000274376
5b
ENSE00001505329
chr5:
86628324-86628459
136
RASA1_HUMAN
231-276
46
1
A:5-6
2
1.6a
ENST00000274376
6a
ENSE00001505328
chr5:
86629084-86629154
71
RASA1_HUMAN
277-300
24
0
-
-
1.7b
ENST00000274376
7b
ENSE00000998759
chr5:
86633791-86633908
118
RASA1_HUMAN
300-339
40
0
-
-
1.8
ENST00000274376
8
ENSE00000998751
chr5:
86637107-86637138
32
RASA1_HUMAN
340-350
11
1
A:7-17
11
1.9
ENST00000274376
9
ENSE00000998749
chr5:
86642489-86642541
53
RASA1_HUMAN
350-368
19
1
A:17-35
19
1.10b
ENST00000274376
10b
ENSE00000998743
chr5:
86645031-86645181
151
RASA1_HUMAN
368-418
51
1
A:35-85
51
1.11
ENST00000274376
11
ENSE00000998758
chr5:
86648974-86649052
79
RASA1_HUMAN
418-444
27
1
A:85-111
27
1.12
ENST00000274376
12
ENSE00000998754
chr5:
86658368-86658488
121
RASA1_HUMAN
445-485
41
1
A:112-119 (gaps)
12
1.13
ENST00000274376
13
ENSE00000998752
chr5:
86659165-86659321
157
RASA1_HUMAN
485-537
53
0
-
-
1.15a
ENST00000274376
15a
ENSE00000998757
chr5:
86665630-86665717
88
RASA1_HUMAN
537-566
30
0
-
-
1.16
ENST00000274376
16
ENSE00000998753
chr5:
86667935-86668012
78
RASA1_HUMAN
567-592
26
0
-
-
1.17
ENST00000274376
17
ENSE00000998748
chr5:
86669980-86670137
158
RASA1_HUMAN
593-645
53
0
-
-
1.18
ENST00000274376
18
ENSE00000998756
chr5:
86670657-86670733
77
RASA1_HUMAN
645-671
27
0
-
-
1.19
ENST00000274376
19
ENSE00001162477
chr5:
86672210-86672382
173
RASA1_HUMAN
671-728
58
0
-
-
1.20
ENST00000274376
20
ENSE00000998738
chr5:
86672698-86672857
160
RASA1_HUMAN
729-782
54
0
-
-
1.21
ENST00000274376
21
ENSE00000998737
chr5:
86674213-86674355
143
RASA1_HUMAN
782-829
48
0
-
-
1.22
ENST00000274376
22
ENSE00000998740
chr5:
86675552-86675667
116
RASA1_HUMAN
830-868
39
0
-
-
1.23
ENST00000274376
23
ENSE00000998755
chr5:
86676326-86676412
87
RASA1_HUMAN
868-897
30
0
-
-
1.24
ENST00000274376
24
ENSE00000998741
chr5:
86679530-86679597
68
RASA1_HUMAN
897-920
24
0
-
-
1.25
ENST00000274376
25
ENSE00000998760
chr5:
86681118-86681206
89
RASA1_HUMAN
920-949
30
0
-
-
1.26
ENST00000274376
26
ENSE00000998739
chr5:
86682643-86682720
78
RASA1_HUMAN
950-975
26
0
-
-
1.27b
ENST00000274376
27b
ENSE00001082148
chr5:
86685210-86685344
135
RASA1_HUMAN
976-1020
45
0
-
-
1.28a
ENST00000274376
28a
ENSE00002051467
chr5:
86686617-86686744
128
RASA1_HUMAN
1021-1047
27
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2gsba_ (A:)
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Organisms
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(
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
SH2-like
(260)
Superfamily
:
SH2 domain
(260)
Family
:
automated matches
(35)
Protein domain
:
automated matches
(35)
Human (Homo sapiens) [TaxId: 9606]
(30)
1a
d2gsba_
A:
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Asymmetric Unit 1
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