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2GLX
Asym. Unit
Info
Asym.Unit (338 KB)
Biol.Unit 1 (63 KB)
Biol.Unit 2 (62 KB)
Biol.Unit 3 (60 KB)
Biol.Unit 4 (58 KB)
Biol.Unit 5 (61 KB)
Biol.Unit 6 (58 KB)
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(1)
Title
:
CRYSTAL STRUCTURE ANALYSIS OF BACTERIAL 1,5-AF REDUCTASE
Authors
:
T. R. Dambe, A. J. Scheidig
Date
:
05 Apr 06 (Deposition) - 29 Aug 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: E (1x)
Biol. Unit 6: F (1x)
Keywords
:
Nadp(H) Dependent Reductase, Rossmann-Fold, Bacterial 1, 5- Anhydro-D-Fructose Reductase, Sugar Metabolism, 1, 5-Anhydro- D-Fructose, 1, 5-Anhydro-D-Mannitol, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. R. Dambe, A. M. Kuehn, T. Brossette, F. Giffhorn, A. J. Scheidig
Crystal Structure Of Nadp(H)-Dependent 1, 5-Anhydro-D-Fructose Reductase From Sinorhizobium Morelense At 2. 2 A Resolution: Construction Of A Nadh-Accepting Mutant And Its Application In Rare Sugar Synthesis
Biochemistry V. 45 10030 2006
(for further references see the
PDB file header
)
[
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Hetero Components
(2, 12)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
1e: ACETATE ION (ACTe)
1f: ACETATE ION (ACTf)
2a: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPa)
2b: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPb)
2c: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPc)
2d: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPd)
2e: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPe)
2f: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
6
Ligand/Ion
ACETATE ION
2
NDP
6
Ligand/Ion
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
[
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LYS A:94 , HIS A:180 , NDP A:1500 , HOH A:1738 , HOH A:1846
BINDING SITE FOR RESIDUE ACT A 1502
02
AC2
SOFTWARE
LYS B:94 , ARG B:163 , HIS B:180 , NDP B:2500 , HOH B:2614 , HOH B:2624
BINDING SITE FOR RESIDUE ACT B 2502
03
AC3
SOFTWARE
LYS C:94 , HIS C:122 , HIS C:180 , GLN C:258 , NDP C:3500 , HOH C:3573 , HOH C:3713
BINDING SITE FOR RESIDUE ACT C 3502
04
AC4
SOFTWARE
LYS D:94 , ARG D:163 , ASP D:176 , HIS D:180 , NDP D:4500 , HOH D:4580
BINDING SITE FOR RESIDUE ACT D 4502
05
AC5
SOFTWARE
LYS E:94 , HIS E:180 , NDP E:5500 , HOH E:5562
BINDING SITE FOR RESIDUE ACT E 5502
06
AC6
SOFTWARE
LYS F:94 , HIS F:180 , GLN F:258 , NDP F:6500 , HOH F:6511 , HOH F:6566
BINDING SITE FOR RESIDUE ACT F 6502
07
AC7
SOFTWARE
GLY A:8 , ALA A:9 , SER A:10 , THR A:11 , ILE A:12 , SER A:33 , THR A:34 , ARG A:38 , SER A:70 , THR A:71 , ASN A:73 , HIS A:76 , GLU A:93 , LYS A:94 , ASN A:120 , HIS A:122 , TRP A:162 , ARG A:163 , TYR A:283 , ACT A:1502 , HOH A:1511 , HOH A:1545 , HOH A:1552 , HOH A:1568 , HOH A:1602 , HOH A:1641 , HOH A:1648 , HOH A:1757
BINDING SITE FOR RESIDUE NDP A 1500
08
AC8
SOFTWARE
GLY B:8 , ALA B:9 , SER B:10 , THR B:11 , ILE B:12 , SER B:33 , THR B:34 , ARG B:38 , SER B:70 , THR B:71 , THR B:72 , ASN B:73 , HIS B:76 , GLU B:93 , LYS B:94 , ASN B:120 , HIS B:122 , LEU B:159 , TRP B:162 , ARG B:163 , TYR B:283 , ACT B:2502 , HOH B:2512 , HOH B:2536 , HOH B:2537 , HOH B:2599 , HOH B:2606 , HOH B:2668 , HOH B:2766
BINDING SITE FOR RESIDUE NDP B 2500
09
AC9
SOFTWARE
GLY C:8 , ALA C:9 , SER C:10 , THR C:11 , ILE C:12 , SER C:33 , THR C:34 , ARG C:38 , SER C:70 , THR C:71 , ASN C:73 , HIS C:76 , GLU C:93 , LYS C:94 , ASN C:120 , HIS C:122 , TRP C:162 , ARG C:163 , GLN C:258 , TYR C:283 , ACT C:3502 , HOH C:3506 , HOH C:3518 , HOH C:3530 , HOH C:3561 , HOH C:3602 , HOH C:3626 , HOH C:3663
BINDING SITE FOR RESIDUE NDP C 3500
10
BC1
SOFTWARE
GLY D:8 , ALA D:9 , SER D:10 , THR D:11 , ILE D:12 , SER D:33 , THR D:34 , ARG D:38 , SER D:70 , THR D:71 , ASN D:73 , HIS D:76 , GLU D:93 , LYS D:94 , ASN D:120 , TRP D:162 , ARG D:163 , ASP D:176 , GLN D:258 , TYR D:283 , ACT D:4502 , HOH D:4510 , HOH D:4525 , HOH D:4554
BINDING SITE FOR RESIDUE NDP D 4500
11
BC2
SOFTWARE
GLY E:8 , ALA E:9 , SER E:10 , THR E:11 , ILE E:12 , SER E:33 , THR E:34 , ARG E:38 , SER E:70 , THR E:71 , ASN E:73 , HIS E:76 , GLU E:93 , LYS E:94 , ASN E:120 , HIS E:122 , TRP E:162 , ARG E:163 , ASP E:176 , GLN E:258 , TYR E:283 , ACT E:5502 , HOH E:5515 , HOH E:5542 , HOH E:5544 , HOH E:5599 , HOH E:5647 , HOH E:5694 , HOH E:5712 , HOH E:5717
BINDING SITE FOR RESIDUE NDP E 5500
12
BC3
SOFTWARE
GLY F:8 , ALA F:9 , SER F:10 , THR F:11 , ILE F:12 , SER F:33 , THR F:34 , ARG F:38 , SER F:70 , THR F:71 , THR F:72 , ASN F:73 , HIS F:76 , GLU F:93 , LYS F:94 , ASN F:120 , HIS F:122 , LEU F:159 , TRP F:162 , ARG F:163 , GLN F:258 , TYR F:283 , ACT F:6502 , HOH F:6532 , HOH F:6580
BINDING SITE FOR RESIDUE NDP F 6500
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (338 KB)
Header - Asym.Unit
Biol.Unit 1 (63 KB)
Header - Biol.Unit 1
Biol.Unit 2 (62 KB)
Header - Biol.Unit 2
Biol.Unit 3 (60 KB)
Header - Biol.Unit 3
Biol.Unit 4 (58 KB)
Header - Biol.Unit 4
Biol.Unit 5 (61 KB)
Header - Biol.Unit 5
Biol.Unit 6 (58 KB)
Header - Biol.Unit 6
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