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2GL7
Asym. Unit
Info
Asym.Unit (175 KB)
Biol.Unit 1 (87 KB)
Biol.Unit 2 (84 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A BETA-CATENIN/BCL9/TCF4 COMPLEX
Authors
:
J. Sampietro
Date
:
04 Apr 06 (Deposition) - 31 Oct 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C (1x)
Biol. Unit 2: D,E,F (1x)
Keywords
:
Protein Complex, Armadillo Repeat, Transcription
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Sampietro, C. L. Dahlberg, U. S. Cho, T. R. Hinds, D. Kimelman, W. Xu
Crystal Structure Of A Beta-Catenin/Bcl9/Tcf4 Complex.
Mol. Cell V. 24 293 2006
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Hetero Components
(0, 0)
Info
All Hetero Components
View:
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Label:
Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
View:
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Label:
Sorry, no Info available
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]
SAPs(SNPs)/Variants
(1, 2)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_072282 (L388P, chain A/D, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_072282
L
388
P
CTNB1_HUMAN
Disease (MRD19)
---
A/D
L
388
P
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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]
PROSITE Patterns/Profiles
(1, 18)
Info
All PROSITE Patterns/Profiles
1: ARM_REPEAT (A:193-236,D:193-236|A:151-191,D:15...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ARM_REPEAT
PS50176
Armadillo/plakoglobin ARM repeat profile.
CTNB1_HUMAN
193-236
151-191
235-277
277-319
319-362
400-442
442-484
489-532
594-636
18
A:193-236
D:193-236
A:151-191
D:151-191
A:235-277
D:235-277
A:277-319
D:277-319
A:319-362
D:319-362
A:400-442
D:400-442
A:442-484
D:442-484
A:489-532
D:489-532
A:594-636
D:594-636
[
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Exons
(12, 24)
Info
All Exons
Exon 1.9 (C:352-374 | F:355-371)
Exon 2.1a (B:12-50 (gaps) | E:12-50 (gaps))
Exon 3.10d (A:142-165 | D:147-165)
Exon 3.11b (A:166-245 | D:166-245)
Exon 3.12 (A:245-312 | D:245-312)
Exon 3.13 (A:313-361 | D:313-361)
Exon 3.14 (A:361-395 | D:361-395)
Exon 3.15 (A:396-508 | D:396-508)
Exon 3.16a (A:509-561 (gaps) | D:509-561 (gaps...)
Exon 3.17b (A:562-601 | D:562-601)
Exon 3.18a (A:602-652 | D:602-652)
Exon 3.18d (A:652-663 | D:652-662)
View:
Select:
Label:
All Exon Boundaries
01: Boundary 1.8/1.9
02: Boundary 1.9/1.10
03: Boundary -/2.1a
04: Boundary 2.1a/2.2
05: Boundary 3.9e/3.10d
06: Boundary 3.10d/3.11b
07: Boundary 3.11b/3.12
08: Boundary 3.12/3.13
09: Boundary 3.13/3.14
10: Boundary 3.14/3.15
11: Boundary 3.15/3.16a
12: Boundary 3.16a/3.17b
13: Boundary 3.17b/3.18a
14: Boundary 3.18a/3.18d
15: Boundary 3.18d/3.19
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000234739
1
ENSE00001344656
chr1:
147013182-147013444
263
BCL9_HUMAN
-
0
0
-
-
1.3
ENST00000234739
3
ENSE00001344647
chr1:
147076570-147076704
135
BCL9_HUMAN
-
0
0
-
-
1.4
ENST00000234739
4
ENSE00001344643
chr1:
147078577-147078659
83
BCL9_HUMAN
-
0
0
-
-
1.5b
ENST00000234739
5b
ENSE00001156130
chr1:
147083377-147083688
312
BCL9_HUMAN
1-18
18
0
-
-
1.6b
ENST00000234739
6b
ENSE00000824226
chr1:
147084682-147084998
317
BCL9_HUMAN
18-124
107
0
-
-
1.7
ENST00000234739
7
ENSE00000787540
chr1:
147086226-147086415
190
BCL9_HUMAN
124-187
64
0
-
-
1.8
ENST00000234739
8
ENSE00000787541
chr1:
147087603-147087702
100
BCL9_HUMAN
187-220
34
0
-
-
1.9
ENST00000234739
9
ENSE00000787543
chr1:
147090622-147092863
2242
BCL9_HUMAN
221-968
748
2
C:352-374
F:355-371
23
17
1.10
ENST00000234739
10
ENSE00000903093
chr1:
147094072-147094332
261
BCL9_HUMAN
968-1055
88
0
-
-
1.11
ENST00000234739
11
ENSE00001156122
chr1:
147095643-147098017
2375
BCL9_HUMAN
1055-1426
372
0
-
-
2.1a
ENST00000355995
1a
ENSE00002177850
chr10:
114710009-114710704
696
TF7L2_HUMAN
1-63
63
2
B:12-50 (gaps)
E:12-50 (gaps)
39
39
2.2
ENST00000355995
2
ENSE00001698297
chr10:
114710966-114711032
67
TF7L2_HUMAN
64-86
23
0
-
-
2.3
ENST00000355995
3
ENSE00001799970
chr10:
114711242-114711366
125
TF7L2_HUMAN
86-127
42
0
-
-
2.4
ENST00000355995
4
ENSE00000987139
chr10:
114724315-114724383
69
TF7L2_HUMAN
128-150
23
0
-
-
2.5
ENST00000355995
5
ENSE00001779044
chr10:
114799784-114799885
102
TF7L2_HUMAN
151-184
34
0
-
-
2.6b
ENST00000355995
6b
ENSE00001752649
chr10:
114849159-114849299
141
TF7L2_HUMAN
185-231
47
0
-
-
2.7
ENST00000355995
7
ENSE00002181071
chr10:
114900943-114901075
133
TF7L2_HUMAN
232-274
43
0
-
-
2.8c
ENST00000355995
8c
ENSE00001595053
chr10:
114903682-114903784
103
TF7L2_HUMAN
-
0
0
-
-
2.9a
ENST00000355995
9a
ENSE00002157916
chr10:
114905770-114905856
87
TF7L2_HUMAN
-
0
0
-
-
2.10b
ENST00000355995
10b
ENSE00001694481
chr10:
114910757-114910882
126
TF7L2_HUMAN
-
0
0
-
-
2.11a
ENST00000355995
11a
ENSE00002170231
chr10:
114911484-114911643
160
TF7L2_HUMAN
-
0
0
-
-
2.12a
ENST00000355995
12a
ENSE00001692504
chr10:
114912092-114912199
108
TF7L2_HUMAN
-
0
0
-
-
2.13b
ENST00000355995
13b
ENSE00001763111
chr10:
114917780-114917828
49
TF7L2_HUMAN
-
0
0
-
-
2.14
ENST00000355995
14
ENSE00001747272
chr10:
114918426-114918476
51
TF7L2_HUMAN
-
0
0
-
-
2.15
ENST00000355995
15
ENSE00001641077
chr10:
114919679-114919751
73
TF7L2_HUMAN
-
0
0
-
-
2.18g
ENST00000355995
18g
ENSE00001804581
chr10:
114925314-114926061
748
TF7L2_HUMAN
-
0
0
-
-
3.4e
ENST00000396185
4e
ENSE00001933873
chr3:
41240996-41241161
166
CTNB1_HUMAN
-
0
0
-
-
3.7
ENST00000396185
7
ENSE00002142861
chr3:
41265512-41265572
61
CTNB1_HUMAN
1-5
5
0
-
-
3.9e
ENST00000396185
9e
ENSE00001697426
chr3:
41266017-41266244
228
CTNB1_HUMAN
5-81
77
0
-
-
3.10d
ENST00000396185
10d
ENSE00001748344
chr3:
41266445-41266698
254
CTNB1_HUMAN
81-165
85
2
A:142-165
D:147-165
24
19
3.11b
ENST00000396185
11b
ENSE00001692569
chr3:
41266825-41267063
239
CTNB1_HUMAN
166-245
80
2
A:166-245
D:166-245
80
80
3.12
ENST00000396185
12
ENSE00001643204
chr3:
41267151-41267352
202
CTNB1_HUMAN
245-312
68
2
A:245-312
D:245-312
68
68
3.13
ENST00000396185
13
ENSE00001767208
chr3:
41268699-41268843
145
CTNB1_HUMAN
313-361
49
2
A:313-361
D:313-361
49
49
3.14
ENST00000396185
14
ENSE00001649367
chr3:
41274832-41274935
104
CTNB1_HUMAN
361-395
35
2
A:361-395
D:361-395
35
35
3.15
ENST00000396185
15
ENSE00001718373
chr3:
41275020-41275358
339
CTNB1_HUMAN
396-508
113
2
A:396-508
D:396-508
113
113
3.16a
ENST00000396185
16a
ENSE00001592339
chr3:
41275630-41275788
159
CTNB1_HUMAN
509-561
53
2
A:509-561 (gaps)
D:509-561 (gaps)
53
53
3.17b
ENST00000396185
17b
ENSE00001707050
chr3:
41277215-41277334
120
CTNB1_HUMAN
562-601
40
2
A:562-601
D:562-601
40
40
3.18a
ENST00000396185
18a
ENSE00002175036
chr3:
41277840-41277990
151
CTNB1_HUMAN
602-652
51
2
A:602-652
D:602-652
51
51
3.18d
ENST00000396185
18d
ENSE00001782706
chr3:
41278079-41278200
122
CTNB1_HUMAN
652-692
41
2
A:652-663
D:652-662
12
11
3.19
ENST00000396185
19
ENSE00001805633
chr3:
41279507-41279567
61
CTNB1_HUMAN
693-713
21
0
-
-
3.20c
ENST00000396185
20c
ENSE00001524181
chr3:
41280625-41280845
221
CTNB1_HUMAN
713-781
69
0
-
-
3.20g
ENST00000396185
20g
ENSE00001524178
chr3:
41281151-41281934
784
CTNB1_HUMAN
-
0
0
-
-
[
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2gl7a_ (A:)
1b: SCOP_d2gl7d_ (D:)
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Protein Domains
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(
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Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
alpha-alpha superhelix
(690)
Superfamily
:
ARM repeat
(317)
Family
:
Armadillo repeat
(77)
Protein domain
:
beta-Catenin
(21)
Human (Homo sapiens) [TaxId: 9606]
(8)
1a
d2gl7a_
A:
1b
d2gl7d_
D:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2gl7D00 (D:147-662)
1b: CATH_2gl7A00 (A:142-663)
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Organisms
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Class
:
Mainly Alpha
(13335)
Architecture
:
Alpha Horseshoe
(399)
Topology
:
Leucine-rich Repeat Variant
(77)
Homologous Superfamily
:
Leucine-rich Repeat Variant
(75)
Human (Homo sapiens)
(30)
1a
2gl7D00
D:147-662
1b
2gl7A00
A:142-663
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Pfam Domains
(0, 0)
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all PFAM domains
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