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2GE9
Asym. Unit
Info
Asym.Unit (626 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURES OF THE SH2 DOMAIN OF BRUTON'S TYROSINE KINASE
Authors
:
J. -W. Cheng, K. -C. Huang
Date
:
18 Mar 06 (Deposition) - 24 Oct 06 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Sh2 Domain, Btk, Structure, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. -C. Huang, H. -T. Cheng, M. -T. Pai, S. -R. Tzeng, J. -W. Cheng
Solution Structure And Phosphopeptide Binding Of The Sh2 Domain From The Human Bruton'S Tyrosine Kinase
J. Biomol. Nmr V. 36 73 2006
(for further references see the
PDB file header
)
[
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Hetero Components
(0, 0)
Info
All Hetero Components
View:
Select:
Label:
Sorry, no Info available
[
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]
Sites
(0, 0)
Info
All Sites
View:
Select:
Label:
Sorry, no Info available
[
close Site info
]
SAPs(SNPs)/Variants
(19, 19)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
01: VAR_008305 (R19Q, chain A, )
02: VAR_006227 (R19W, chain A, )
03: VAR_006228 (L26P, chain A, )
04: VAR_006230 (G33E, chain A, )
05: VAR_008306 (G33R, chain A, )
06: VAR_006231 (R38G, chain A, )
07: VAR_008307 (R38T, chain A, )
08: VAR_008308 (D39E, chain A, )
09: VAR_008309 (V50A, chain A, )
10: VAR_006232 (Y65S, chain A, )
11: VAR_006233 (L89F, chain A, )
12: VAR_006234 (Y92C, chain A, )
13: VAR_006235 (H93Q, chain A, )
14: VAR_006236 (H95P, chain A, )
15: VAR_006237 (N96Y, chain A, )
16: VAR_008310 (S97F, chain A, )
17: VAR_008311 (L100F, chain A, )
18: VAR_006238 (I101M, chain A, )
19: VAR_008312 (R103G, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_008305
R
288
Q
BTK_HUMAN
Disease (XLA)
---
A
R
19
Q
02
UniProt
VAR_006227
R
288
W
BTK_HUMAN
Disease (XLA)
---
A
R
19
W
03
UniProt
VAR_006228
L
295
P
BTK_HUMAN
Disease (XLA)
---
A
L
26
P
04
UniProt
VAR_006230
G
302
E
BTK_HUMAN
Disease (XLA)
---
A
G
33
E
05
UniProt
VAR_008306
G
302
R
BTK_HUMAN
Disease (XLA)
---
A
G
33
R
06
UniProt
VAR_006231
R
307
G
BTK_HUMAN
Disease (XLA)
---
A
R
38
G
07
UniProt
VAR_008307
R
307
T
BTK_HUMAN
Disease (XLA)
---
A
R
38
T
08
UniProt
VAR_008308
D
308
E
BTK_HUMAN
Disease (XLA)
---
A
D
39
E
09
UniProt
VAR_008309
V
319
A
BTK_HUMAN
Disease (XLA)
---
A
V
50
A
10
UniProt
VAR_006232
Y
334
S
BTK_HUMAN
Disease (XLA)
---
A
Y
65
S
11
UniProt
VAR_006233
L
358
F
BTK_HUMAN
Disease (XLA)
---
A
L
89
F
12
UniProt
VAR_006234
Y
361
C
BTK_HUMAN
Disease (XLA)
28935478
A
Y
92
C
13
UniProt
VAR_006235
H
362
Q
BTK_HUMAN
Disease (XLA)
---
A
H
93
Q
14
UniProt
VAR_006236
H
364
P
BTK_HUMAN
Disease (XLA)
---
A
H
95
P
15
UniProt
VAR_006237
N
365
Y
BTK_HUMAN
Disease (XLA)
---
A
N
96
Y
16
UniProt
VAR_008310
S
366
F
BTK_HUMAN
Disease (XLA)
---
A
S
97
F
17
UniProt
VAR_008311
L
369
F
BTK_HUMAN
Disease (XLA)
---
A
L
100
F
18
UniProt
VAR_006238
I
370
M
BTK_HUMAN
Disease (XLA)
---
A
I
101
M
19
UniProt
VAR_008312
R
372
G
BTK_HUMAN
Disease (XLA)
---
A
R
103
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: SH2 (A:12-108)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SH2
PS50001
Src homology 2 (SH2) domain profile.
BTK_HUMAN
281-377
1
A:12-108
[
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]
Exons
(5, 5)
Info
All Exons
Exon 1.10 (A:1-11)
Exon 1.11 (A:11-29)
Exon 1.12 (A:30-56)
Exon 1.13b (A:56-99)
Exon 1.14b (A:99-118)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.9/1.10
2: Boundary 1.10/1.11
3: Boundary 1.11/1.12
4: Boundary 1.12/1.13b
5: Boundary 1.13b/1.14b
6: Boundary 1.14b/1.15a
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000308731
1b
ENSE00001821870
X:100641183-100641050
134
BTK_HUMAN
-
0
0
-
-
1.3
ENST00000308731
3
ENSE00002149458
X:100630302-100630132
171
BTK_HUMAN
1-47
47
0
-
-
1.4a
ENST00000308731
4a
ENSE00001643950
X:100629622-100629524
99
BTK_HUMAN
48-80
33
0
-
-
1.5
ENST00000308731
5
ENSE00001646803
X:100626689-100626621
69
BTK_HUMAN
81-103
23
0
-
-
1.6
ENST00000308731
6
ENSE00001698702
X:100625067-100624986
82
BTK_HUMAN
104-131
28
0
-
-
1.7b
ENST00000308731
7b
ENSE00001643964
X:100617677-100617549
129
BTK_HUMAN
131-174
44
0
-
-
1.8b
ENST00000308731
8b
ENSE00001601394
X:100617228-100617161
68
BTK_HUMAN
174-196
23
0
-
-
1.9
ENST00000308731
9
ENSE00001608013
X:100615743-100615556
188
BTK_HUMAN
197-259
63
0
-
-
1.10
ENST00000308731
10
ENSE00001712685
X:100615138-100615076
63
BTK_HUMAN
259-280
22
1
A:1-11
11
1.11
ENST00000308731
11
ENSE00001801955
X:100614335-100614281
55
BTK_HUMAN
280-298
19
1
A:11-29
19
1.12
ENST00000308731
12
ENSE00000673984
X:100613684-100613605
80
BTK_HUMAN
299-325
27
1
A:30-56
27
1.13b
ENST00000308731
13b
ENSE00000673983
X:100613425-100613298
128
BTK_HUMAN
325-368
44
1
A:56-99
44
1.14b
ENST00000308731
14b
ENSE00000673982
X:100612571-100612497
75
BTK_HUMAN
368-393
26
1
A:99-118
20
1.15a
ENST00000308731
15a
ENSE00000673981
X:100611943-100611772
172
BTK_HUMAN
393-450
58
0
-
-
1.16b
ENST00000308731
16b
ENSE00000673980
X:100611256-100611040
217
BTK_HUMAN
450-522
73
0
-
-
1.17
ENST00000308731
17
ENSE00000673977
X:100609682-100609618
65
BTK_HUMAN
523-544
22
0
-
-
1.18b
ENST00000308731
18b
ENSE00001780523
X:100608976-100608858
119
BTK_HUMAN
544-584
41
0
-
-
1.19b
ENST00000308731
19b
ENSE00001702496
X:100608339-100608182
158
BTK_HUMAN
584-636
53
0
-
-
1.20b
ENST00000308731
20b
ENSE00001855631
X:100604944-100604438
507
BTK_HUMAN
637-659
23
0
-
-
[
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]
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2ge9a_ (A:)
View:
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Classes
(
)
(
)
Folds
(
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(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
SH2-like
(260)
Superfamily
:
SH2 domain
(260)
Family
:
automated matches
(35)
Protein domain
:
automated matches
(35)
Human (Homo sapiens) [TaxId: 9606]
(30)
1a
d2ge9a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2ge9A00 (A:1-118)
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(
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(
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(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
SHC Adaptor Protein
(206)
Homologous Superfamily
:
SHC Adaptor Protein
(206)
Human (Homo sapiens)
(147)
1a
2ge9A00
A:1-118
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Chain A
Asymmetric Unit 1
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