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2FXO
Asym. Unit
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Asym.Unit (90 KB)
Biol.Unit 1 (44 KB)
Biol.Unit 2 (44 KB)
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(1)
Title
:
STRUCTURE OF THE HUMAN BETA-MYOSIN S2 FRAGMENT
Authors
:
W. Blankenfeldt, N. H. Thoma, J. S. Wray, M. Gautel, I. Schlichting
Date
:
06 Feb 06 (Deposition) - 21 Nov 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Coiled Coil (Dimeric, Parallel), Familial Hypertrophic Cardiomyopathy, Fhc-Associated Mutant E924K, Thick Filament, Contractile Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
W. Blankenfeldt, N. H. Thoma, J. S. Wray, M. Gautel, I. Schlichting
Crystal Structures Of Human Cardiac {Beta}-Myosin Ii S2-{Delta} Provide Insight Into The Functional Role Of The S2 Subfragment
Proc. Natl. Acad. Sci. Usa V. 103 17713 2006
(for further references see the
PDB file header
)
[
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]
Hetero Components
(0, 0)
Info
All Hetero Components
View:
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Label:
Sorry, no Info available
[
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]
Sites
(0, 0)
Info
All Sites
View:
Select:
Label:
Sorry, no Info available
[
close Site info
]
SAPs(SNPs)/Variants
(28, 106)
Info
(mutated residues are not available)
All SNPs/Variants
01: VAR_029441 (S-2I, chain A, )
02: VAR_042807 (G-3E, chain A, )
03: VAR_020814 (E846Q, chain A/B/C/D, )
04: VAR_019862 (M852T, chain A/B/C/D, )
05: VAR_039563 (R858C, chain A/B/C/D, )
06: VAR_042809 (R858H, chain A/B/C/D, )
07: VAR_020815 (R869C, chain A/B/C/D, )
08: VAR_019863 (R869G, chain A/B/C/D, )
09: VAR_042810 (R869H, chain A/B/C/D, )
10: VAR_020816 (R870C, chain A/B/C/D, )
11: VAR_004592 (R870H, chain A/B/C/D, )
12: VAR_020817 (M877K, chain A/B/C/D, )
13: VAR_042811 (Q882E, chain A/B/C/D, )
14: VAR_042812 (E894G, chain A/B/C/D, )
15: VAR_042813 (A901G, chain A/B/C/D, )
16: VAR_029442 (C905F, chain A/B/C/D, )
17: VAR_042814 (D906G, chain A/B/C/D, )
18: VAR_004593 (L908V, chain A/B/C/D, )
19: VAR_042815 (E921K, chain A/B/C/D, )
20: VAR_004594 (K924K, chain A/B/C/D, )
21: VAR_029443 (K924Q, chain A/B/C/D, )
22: VAR_042816 (E927K, chain A/B/C/D, )
23: VAR_029444 (D928N, chain A/B/C/D, )
24: VAR_004595 (E930K, chain A/B/C/D, )
25: VAR_042817 (E931K, chain A/B/C/D, )
26: VAR_004597 (E935K, chain A/B/C/D, )
27: VAR_004598 (E949K, chain A/B/C/D, )
28: VAR_042818 (D953H, chain A/B/C/D, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_029441
V
824
I
MYH7_HUMAN
Disease (CMH1)
---
A
S
-2
I
02
UniProt
VAR_042807
G
823
E
MYH7_HUMAN
Disease (CMH1)
---
A
G
-3
E
03
UniProt
VAR_020814
E
846
Q
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
E
846
Q
04
UniProt
VAR_019862
M
852
T
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
M
852
T
05
UniProt
VAR_039563
R
858
C
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
R
858
C
06
UniProt
VAR_042809
R
858
H
MYH7_HUMAN
Disease (CMH1)
2856897
A/B/C/D
R
858
H
07
UniProt
VAR_020815
R
869
C
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
R
869
C
08
UniProt
VAR_019863
R
869
G
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
R
869
G
09
UniProt
VAR_042810
R
869
H
MYH7_HUMAN
Disease (CMH1)
202141173
A/B/C/D
R
869
H
10
UniProt
VAR_020816
R
870
C
MYH7_HUMAN
Disease (CMH1)
36211715
A/B/C/D
R
870
C
11
UniProt
VAR_004592
R
870
H
MYH7_HUMAN
Disease (CMH1)
36211715
A/B/C/D
R
870
H
12
UniProt
VAR_020817
M
877
K
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
M
877
K
13
UniProt
VAR_042811
Q
882
E
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
Q
882
E
14
UniProt
VAR_042812
E
894
G
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
E
894
G
15
UniProt
VAR_042813
A
901
G
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
A
901
G
16
UniProt
VAR_029442
C
905
F
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
C
905
F
17
UniProt
VAR_042814
D
906
G
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
D
906
G
18
UniProt
VAR_004593
L
908
V
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
L
908
V
19
UniProt
VAR_042815
E
921
K
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
E
921
K
20
UniProt
VAR_004594
E
924
K
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
K
924
K
21
UniProt
VAR_029443
E
924
Q
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
K
924
Q
22
UniProt
VAR_042816
E
927
K
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
E
927
K
23
UniProt
VAR_029444
D
928
N
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
D
928
N
24
UniProt
VAR_004595
E
930
K
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
E
930
K
25
UniProt
VAR_042817
E
931
K
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
E
931
K
26
UniProt
VAR_004597
E
935
K
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
E
935
K
27
UniProt
VAR_004598
E
949
K
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
E
949
K
28
UniProt
VAR_042818
D
953
H
MYH7_HUMAN
Disease (CMH1)
---
A/B/C/D
D
953
H
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
Select:
Label:
End label:
Sorry, no Info available
[
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]
Exons
(2, 8)
Info
All Exons
Exon 1.22 (A:-3-893 (gaps) | B:-1-893 | C:-2-...)
Exon 1.23 (A:894-963 | B:894-961 | C:894-962 ...)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.21/1.22
2: Boundary 1.22/1.23
3: Boundary 1.23/1.24
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000355349
1b
ENSE00001333122
chr14:
23904870-23904829
42
MYH7_HUMAN
-
0
0
-
-
1.2b
ENST00000355349
2b
ENSE00001333121
chr14:
23903458-23903403
56
MYH7_HUMAN
-
0
0
-
-
1.3
ENST00000355349
3
ENSE00002141330
chr14:
23902949-23902741
209
MYH7_HUMAN
1-67
67
0
-
-
1.4
ENST00000355349
4
ENSE00000654043
chr14:
23902436-23902293
144
MYH7_HUMAN
68-115
48
0
-
-
1.5
ENST00000355349
5
ENSE00001647421
chr14:
23902004-23901848
157
MYH7_HUMAN
116-168
53
0
-
-
1.6
ENST00000355349
6
ENSE00000654040
chr14:
23901715-23901688
28
MYH7_HUMAN
168-177
10
0
-
-
1.7
ENST00000355349
7
ENSE00000654039
chr14:
23901078-23900970
109
MYH7_HUMAN
177-213
37
0
-
-
1.8
ENST00000355349
8
ENSE00001805709
chr14:
23900886-23900794
93
MYH7_HUMAN
214-244
31
0
-
-
1.9
ENST00000355349
9
ENSE00001610903
chr14:
23900690-23900627
64
MYH7_HUMAN
245-266
22
0
-
-
1.10
ENST00000355349
10
ENSE00001797612
chr14:
23900208-23900110
99
MYH7_HUMAN
266-299
34
0
-
-
1.11
ENST00000355349
11
ENSE00000654035
chr14:
23899872-23899769
104
MYH7_HUMAN
299-333
35
0
-
-
1.12
ENST00000355349
12
ENSE00001802826
chr14:
23899122-23898984
139
MYH7_HUMAN
334-380
47
0
-
-
1.13
ENST00000355349
13
ENSE00000654032
chr14:
23898556-23898438
119
MYH7_HUMAN
380-419
40
0
-
-
1.14
ENST00000355349
14
ENSE00000654031
chr14:
23898313-23898164
150
MYH7_HUMAN
420-469
50
0
-
-
1.15
ENST00000355349
15
ENSE00001747242
chr14:
23897879-23897709
171
MYH7_HUMAN
470-526
57
0
-
-
1.16
ENST00000355349
16
ENSE00000654029
chr14:
23897103-23896794
310
MYH7_HUMAN
527-630
104
0
-
-
1.17
ENST00000355349
17
ENSE00000654028
chr14:
23896516-23896449
68
MYH7_HUMAN
630-652
23
0
-
-
1.18
ENST00000355349
18
ENSE00001797702
chr14:
23896073-23895986
88
MYH7_HUMAN
653-682
30
0
-
-
1.19
ENST00000355349
19
ENSE00001643045
chr14:
23895290-23895173
118
MYH7_HUMAN
682-721
40
0
-
-
1.20
ENST00000355349
20
ENSE00001618128
chr14:
23895027-23894904
124
MYH7_HUMAN
721-762
42
0
-
-
1.21
ENST00000355349
21
ENSE00000654023
chr14:
23894627-23894491
137
MYH7_HUMAN
763-808
46
0
-
-
1.22
ENST00000355349
22
ENSE00000654022
chr14:
23894233-23893978
256
MYH7_HUMAN
808-893
86
4
A:-3-893 (gaps)
B:-1-893
C:-2-893
D:-1-893
71
57
58
57
1.23
ENST00000355349
23
ENSE00001625387
chr14:
23893358-23893116
243
MYH7_HUMAN
894-974
81
4
A:894-963
B:894-961
C:894-962
D:894-963
70
68
69
70
1.24
ENST00000355349
24
ENSE00001636102
chr14:
23892932-23892756
177
MYH7_HUMAN
975-1033
59
0
-
-
1.25
ENST00000355349
25
ENSE00001767436
chr14:
23891534-23891389
146
MYH7_HUMAN
1034-1082
49
0
-
-
1.26
ENST00000355349
26
ENSE00000586050
chr14:
23890257-23890167
91
MYH7_HUMAN
1082-1112
31
0
-
-
1.27
ENST00000355349
27
ENSE00001776760
chr14:
23889443-23889054
390
MYH7_HUMAN
1113-1242
130
0
-
-
1.28
ENST00000355349
28
ENSE00000654015
chr14:
23888818-23888692
127
MYH7_HUMAN
1243-1285
43
0
-
-
1.29
ENST00000355349
29
ENSE00001711774
chr14:
23888504-23888386
119
MYH7_HUMAN
1285-1324
40
0
-
-
1.30
ENST00000355349
30
ENSE00001661625
chr14:
23887615-23887419
197
MYH7_HUMAN
1325-1390
66
0
-
-
1.31
ENST00000355349
31
ENSE00000654012
chr14:
23886895-23886712
184
MYH7_HUMAN
1390-1451
62
0
-
-
1.32
ENST00000355349
32
ENSE00001720186
chr14:
23886527-23886362
166
MYH7_HUMAN
1452-1507
56
0
-
-
1.33
ENST00000355349
33
ENSE00000654010
chr14:
23886201-23886077
125
MYH7_HUMAN
1507-1548
42
0
-
-
1.34
ENST00000355349
34
ENSE00001701082
chr14:
23885521-23885213
309
MYH7_HUMAN
1549-1651
103
0
-
-
1.35
ENST00000355349
35
ENSE00001690609
chr14:
23885041-23884838
204
MYH7_HUMAN
1652-1719
68
0
-
-
1.36
ENST00000355349
36
ENSE00001766234
chr14:
23884715-23884590
126
MYH7_HUMAN
1720-1761
42
0
-
-
1.37
ENST00000355349
37
ENSE00001758206
chr14:
23884479-23884204
276
MYH7_HUMAN
1762-1853
92
0
-
-
1.38
ENST00000355349
38
ENSE00001617095
chr14:
23883311-23883216
96
MYH7_HUMAN
1854-1885
32
0
-
-
1.39
ENST00000355349
39
ENSE00001666341
chr14:
23883102-23882968
135
MYH7_HUMAN
1886-1930
45
0
-
-
1.40a
ENST00000355349
40a
ENSE00001527594
chr14:
23882080-23881950
131
MYH7_HUMAN
1931-1935
5
0
-
-
[
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d2fxoa1 (A:838-963)
1b: SCOP_d2fxob_ (B:)
1c: SCOP_d2fxoc_ (C:)
1d: SCOP_d2fxod_ (D:)
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Class
:
Coiled coil proteins
(689)
Fold
:
Parallel coiled-coil
(407)
Superfamily
:
Myosin rod fragments
(4)
Family
:
Myosin rod fragments
(4)
Protein domain
:
Myosin heavy chain, cardiac muscle beta isoform
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d2fxoa1
A:838-963
1b
d2fxob_
B:
1c
d2fxoc_
C:
1d
d2fxod_
D:
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