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2FSS
Biol. Unit 2
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Asym.Unit (243 KB)
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Biol.Unit 3 (239 KB)
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(1)
Title
:
CANDIDA BOIDINII FORMATE DEHYDROGENASE (FDH) K47E MUTANT
Authors
:
K. Schirwitz, A. Schmidt, V. S. Lamzin
Date
:
23 Jan 06 (Deposition) - 13 Feb 07 (Release) - 28 Apr 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,D (1x)
Biol. Unit 2: B,C (1x)
Biol. Unit 3: A,B,C,D (1x)
Keywords
:
Rossmann Fold, Protein Homo Dimer, Nad Binding Site, Formate Binding Site, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Schirwitz, A. Schmidt, V. S. Lamzin
High-Resolution Structures Of Formate Dehydrogenase From Candida Boidinii.
Protein Sci. V. 16 1146 2007
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: SULFATE ION (SO4a)
1b: SULFATE ION (SO4b)
1c: SULFATE ION (SO4c)
1d: SULFATE ION (SO4d)
1e: SULFATE ION (SO4e)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(3, 3)
Info
All Sites
1: AC2 (SOFTWARE)
2: AC3 (SOFTWARE)
3: AC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
LYS A:109 , GLN C:197 , ALA C:198 , ARG C:211 , HOH C:2034 , HOH C:2192
BINDING SITE FOR RESIDUE SO4 C 2002
2
AC3
SOFTWARE
ALA A:198 , ARG A:211 , HOH A:2021 , LYS C:109
BINDING SITE FOR RESIDUE SO4 A 2003
3
AC4
SOFTWARE
GLY C:173 , ARG C:174 , HOH C:2047
BINDING SITE FOR RESIDUE SO4 C 2004
[
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SAPs(SNPs)/Variants
(11, 22)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
01: VAR_FDH_CANBO_001 (D9G, chain B/C, )
02: VAR_FDH_CANBO_002 (V53V, chain B/C, )
03: VAR_FDH_CANBO_003 (Q56Q, chain B/C, )
04: VAR_FDH_CANBO_004 (I79I, chain B/C, )
05: VAR_FDH_CANBO_005 (K84K, chain B/C, )
06: VAR_FDH_CANBO_006 (K108R, chain B/C, )
07: VAR_FDH_CANBO_007 (I145N, chain B/C, )
08: VAR_FDH_CANBO_008 (V184V, chain B/C, )
09: VAR_FDH_CANBO_009 (D202D, chain B/C, )
10: VAR_FDH_CANBO_010 (M308T, chain B/C, )
11: VAR_FDH_CANBO_011 (Q325Q, chain B/C, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_FDH_CANBO_001
*
D
9
G
FDH_CANBO
---
---
B/C
D
9
G
02
UniProt
VAR_FDH_CANBO_002
*
E
53
V
FDH_CANBO
---
---
B/C
V
53
V
03
UniProt
VAR_FDH_CANBO_003
*
K
56
Q
FDH_CANBO
---
---
B/C
Q
56
Q
04
UniProt
VAR_FDH_CANBO_004
*
L
79
I
FDH_CANBO
---
---
B/C
I
79
I
05
UniProt
VAR_FDH_CANBO_005
*
N
84
K
FDH_CANBO
---
---
B/C
K
84
K
06
UniProt
VAR_FDH_CANBO_006
*
K
108
R
FDH_CANBO
---
---
B/C
K
108
R
07
UniProt
VAR_FDH_CANBO_007
*
I
145
N
FDH_CANBO
---
---
B/C
I
145
N
08
UniProt
VAR_FDH_CANBO_008
*
L
184
V
FDH_CANBO
---
---
B/C
V
184
V
09
UniProt
VAR_FDH_CANBO_009
*
E
202
D
FDH_CANBO
---
---
B/C
D
202
D
10
UniProt
VAR_FDH_CANBO_010
*
M
308
T
FDH_CANBO
---
---
B/C
M
308
T
11
UniProt
VAR_FDH_CANBO_011
*
E
325
Q
FDH_CANBO
---
---
B/C
Q
325
Q
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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]
PROSITE Patterns/Profiles
(3, 6)
Info
All PROSITE Patterns/Profiles
1: D_2_HYDROXYACID_DH_1 (B:167-195,C:167-195)
2: D_2_HYDROXYACID_DH_2 (B:218-240,C:218-240)
3: D_2_HYDROXYACID_DH_3 (B:247-263,C:247-263)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
D_2_HYDROXYACID_DH_1
PS00065
D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature.
FDH_CANBO
167-195
2
-
B:167-195
C:167-195
-
2
D_2_HYDROXYACID_DH_2
PS00670
D-isomer specific 2-hydroxyacid dehydrogenases signature 2.
FDH_CANBO
218-240
2
-
B:218-240
C:218-240
-
3
D_2_HYDROXYACID_DH_3
PS00671
D-isomer specific 2-hydroxyacid dehydrogenases signature 3.
FDH_CANBO
247-263
2
-
B:247-263
C:247-263
-
[
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Exons
(0, 0)
Info
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SCOP Domains
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Asym.Unit (243 KB)
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