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Asym. Unit
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Asym.Unit (30 KB)
Biol.Unit 1 (27 KB)
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(1)
Title
:
THE CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF HAUSP/USP7 COMPLEXED WITH P53 PEPTIDE 359-362
Authors
:
V. Saridakis, Y. Sheng, F. Sarkari, S. Duan, T. Wu, C. H. Arrowsmith, L. F
Date
:
13 Jan 06 (Deposition) - 14 Feb 06 (Release) - 21 Dec 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Math Domain, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Sheng, V. Saridakis, F. Sarkari, S. Duan, T. Wu, C. H. Arrowsmith, L. Frappier
Molecular Recognition Of P53 And Mdm2 By Usp7/Hausp
Nat. Struct. Mol. Biol. V. 13 285 2006
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Hetero Components
(0, 0)
Info
All Hetero Components
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Label:
Sorry, no Info available
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]
Sites
(0, 0)
Info
All Sites
View:
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Label:
Sorry, no Info available
[
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]
SAPs(SNPs)/Variants
(5, 5)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_045560 (E358D, chain B, )
2: VAR_045561 (E358K, chain B, )
3: VAR_045562 (G360A, chain B, )
4: VAR_045563 (G360V, chain B, )
5: VAR_045564 (R363K, chain B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_045560
E
358
D
P53_HUMAN
Unclassified
---
B
E
358
D
2
UniProt
VAR_045561
E
358
K
P53_HUMAN
Unclassified
---
B
E
358
K
3
UniProt
VAR_045562
G
360
A
P53_HUMAN
Polymorphism
35993958
B
G
360
A
4
UniProt
VAR_045563
G
360
V
P53_HUMAN
Unclassified
---
B
G
360
V
5
UniProt
VAR_045564
R
363
K
P53_HUMAN
Unclassified
---
B
R
363
K
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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]
PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: MATH (A:68-195)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
MATH
PS50144
MATH/TRAF domain profile.
UBP7_HUMAN
68-195
1
A:68-195
[
close PROSITE info
]
Exons
(5, 5)
Info
All Exons
Exon 1.11 (B:358-363)
Exon 2.4 (A:63-128 (gaps))
Exon 2.5 (A:128-174)
Exon 2.6 (A:175-204)
Exon 2.7 (A:204-205)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.9/1.11
2: Boundary 1.11/1.12d
3: Boundary 2.3/2.4
4: Boundary 2.4/2.5
5: Boundary 2.5/2.6
6: Boundary 2.6/2.7
7: Boundary 2.7/2.8
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000269305
1a
ENSE00001146308
chr17:
7590856-7590695
162
P53_HUMAN
-
0
0
-
-
1.3a
ENST00000269305
3a
ENSE00002194362
chr17:
7579940-7579839
102
P53_HUMAN
1-25
25
0
-
-
1.3d
ENST00000269305
3d
ENSE00001710434
chr17:
7579721-7579700
22
P53_HUMAN
25-32
8
0
-
-
1.4b
ENST00000269305
4b
ENSE00001718735
chr17:
7579590-7579312
279
P53_HUMAN
33-125
93
0
-
-
1.5d
ENST00000269305
5d
ENSE00001255919
chr17:
7578554-7578371
184
P53_HUMAN
126-187
62
0
-
-
1.6a
ENST00000269305
6a
ENSE00001255912
chr17:
7578289-7578177
113
P53_HUMAN
187-224
38
0
-
-
1.7b
ENST00000269305
7b
ENSE00001665758
chr17:
7577608-7577499
110
P53_HUMAN
225-261
37
0
-
-
1.8
ENST00000269305
8
ENSE00001789298
chr17:
7577155-7577019
137
P53_HUMAN
261-307
47
0
-
-
1.9
ENST00000269305
9
ENSE00002149110
chr17:
7576926-7576853
74
P53_HUMAN
307-331
25
0
-
-
1.11
ENST00000269305
11
ENSE00001728015
chr17:
7574033-7573927
107
P53_HUMAN
332-367
36
1
B:358-363
6
1.12d
ENST00000269305
12d
ENSE00001757276
chr17:
7573008-7571720
1289
P53_HUMAN
367-393
27
0
-
-
2.1
ENST00000344836
1
ENSE00001413420
chr16:
9057341-9057064
278
UBP7_HUMAN
1-27
27
0
-
-
2.3
ENST00000344836
3
ENSE00001363956
chr16:
9024254-9024150
105
UBP7_HUMAN
27-62
36
0
-
-
2.4
ENST00000344836
4
ENSE00001368599
chr16:
9017270-9017072
199
UBP7_HUMAN
62-128
67
1
A:63-128 (gaps)
66
2.5
ENST00000344836
5
ENSE00001378973
chr16:
9015152-9015014
139
UBP7_HUMAN
128-174
47
1
A:128-174
47
2.6
ENST00000344836
6
ENSE00001384498
chr16:
9014304-9014216
89
UBP7_HUMAN
175-204
30
1
A:175-204
30
2.7
ENST00000344836
7
ENSE00001364655
chr16:
9012996-9012888
109
UBP7_HUMAN
204-240
37
1
A:204-205
2
2.8
ENST00000344836
8
ENSE00001371018
chr16:
9011013-9010883
131
UBP7_HUMAN
241-284
44
0
-
-
2.9
ENST00000344836
9
ENSE00001378062
chr16:
9010413-9010359
55
UBP7_HUMAN
284-302
19
0
-
-
2.10
ENST00000344836
10
ENSE00001382791
chr16:
9009382-9009302
81
UBP7_HUMAN
303-329
27
0
-
-
2.11
ENST00000344836
11
ENSE00001382051
chr16:
9009201-9009111
91
UBP7_HUMAN
330-360
31
0
-
-
2.12
ENST00000344836
12
ENSE00001364905
chr16:
9004684-9004602
83
UBP7_HUMAN
360-387
28
0
-
-
2.13
ENST00000344836
13
ENSE00001369206
chr16:
9002307-9002198
110
UBP7_HUMAN
388-424
37
0
-
-
2.14
ENST00000344836
14
ENSE00001370062
chr16:
9000439-9000283
157
UBP7_HUMAN
424-476
53
0
-
-
2.15
ENST00000344836
15
ENSE00001386233
chr16:
8999188-8999044
145
UBP7_HUMAN
477-525
49
0
-
-
2.16
ENST00000344836
16
ENSE00001369997
chr16:
8998422-8998292
131
UBP7_HUMAN
525-568
44
0
-
-
2.17
ENST00000344836
17
ENSE00001373075
chr16:
8997259-8997125
135
UBP7_HUMAN
569-613
45
0
-
-
2.18
ENST00000344836
18
ENSE00001385270
chr16:
8996339-8996238
102
UBP7_HUMAN
614-647
34
0
-
-
2.19
ENST00000344836
19
ENSE00001366300
chr16:
8996044-8995939
106
UBP7_HUMAN
648-683
36
0
-
-
2.20
ENST00000344836
20
ENSE00001403793
chr16:
8995091-8994999
93
UBP7_HUMAN
683-714
32
0
-
-
2.21
ENST00000344836
21
ENSE00001416021
chr16:
8994914-8994847
68
UBP7_HUMAN
714-736
23
0
-
-
2.22
ENST00000344836
22
ENSE00001413036
chr16:
8994487-8994387
101
UBP7_HUMAN
737-770
34
0
-
-
2.23
ENST00000344836
23
ENSE00001425600
chr16:
8993614-8993461
154
UBP7_HUMAN
770-821
52
0
-
-
2.24
ENST00000344836
24
ENSE00001432172
chr16:
8993045-8992978
68
UBP7_HUMAN
822-844
23
0
-
-
2.25
ENST00000344836
25
ENSE00001431013
chr16:
8992496-8992388
109
UBP7_HUMAN
844-880
37
0
-
-
2.26
ENST00000344836
26
ENSE00001407007
chr16:
8992294-8992217
78
UBP7_HUMAN
881-906
26
0
-
-
2.27
ENST00000344836
27
ENSE00001504725
chr16:
8990956-8990856
101
UBP7_HUMAN
907-940
34
0
-
-
2.28
ENST00000344836
28
ENSE00001504724
chr16:
8989598-8989499
100
UBP7_HUMAN
940-973
34
0
-
-
2.29
ENST00000344836
29
ENSE00001423657
chr16:
8989007-8988888
120
UBP7_HUMAN
974-1013
40
0
-
-
2.30
ENST00000344836
30
ENSE00001428927
chr16:
8988712-8988641
72
UBP7_HUMAN
1014-1037
24
0
-
-
2.31
ENST00000344836
31
ENSE00001400057
chr16:
8988497-8988407
91
UBP7_HUMAN
1038-1068
31
0
-
-
2.32b
ENST00000344836
32b
ENSE00001404180
chr16:
8987961-8985951
2011
UBP7_HUMAN
1068-1102
35
0
-
-
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Pfam Domains
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all PFAM domains
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Sorry, no Info available
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