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2FO1
Asym. Unit
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Asym.Unit (139 KB)
Biol.Unit 1 (131 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE CSL-NOTCH-MASTERMIND TERNARY COMPLEX BOUND TO DNA
Authors
:
J. J. Wilson, R. A. Kovall
Date
:
12 Jan 06 (Deposition) - 21 Mar 06 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.12
Chains
:
Asym. Unit : A,B,C,D,E
Biol. Unit 1: A,B,C,D,E (1x)
Keywords
:
Beta-Barrel, Protein-Dna Complex, Double Helix, Ankyrin Repeat, Gene Regulation/Signalling Protein/Dna Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. J. Wilson, R. A. Kovall
Crystal Structure Of The Csl-Notch-Mastermind Ternary Complex Bound To Dna.
Cell(Cambridge, Mass. ) V. 124 985 2006
(for further references see the
PDB file header
)
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Hetero Components
(1, 14)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1b: SELENOMETHIONINE (MSEb)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
1i: SELENOMETHIONINE (MSEi)
1j: SELENOMETHIONINE (MSEj)
1k: SELENOMETHIONINE (MSEk)
1l: SELENOMETHIONINE (MSEl)
1m: SELENOMETHIONINE (MSEm)
1n: SELENOMETHIONINE (MSEn)
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No.
Name
Count
Type
Full Name
1
MSE
14
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: ANK_REP_REGION (E:1052-1293)
2: ANK_REPEAT (E:1093-1125|E:1240-1272|E:1206-123...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ANK_REP_REGION
PS50297
Ankyrin repeat region circular profile.
LIN12_CAEEL
1052-1293
1
E:1052-1293
2
ANK_REPEAT
PS50088
Ankyrin repeat profile.
LIN12_CAEEL
1093-1125
1240-1272
1206-1239
3
E:1093-1125
E:1240-1272
E:1206-1239
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(5, 5)
Info
All SCOP Domains
1a: SCOP_d2fo1d1 (D:52-114)
2a: SCOP_d2fo1a3 (A:381-541)
3a: SCOP_d2fo1a2 (A:196-380)
4a: SCOP_d2fo1a1 (A:542-660)
5a: SCOP_d2fo1e1 (E:1021-1297)
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Protein Domains
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Class
:
All alpha proteins
(14657)
Fold
:
Non-globular all-alpha subunits of globular proteins
(135)
Superfamily
:
Lag-3 N-terminal region
(1)
Family
:
Lag-3 N-terminal region
(1)
Protein domain
:
Abnormal cell lineage protein 3, Lag-3
(1)
Nematode (Caenorhabditis elegans) [TaxId: 6239]
(1)
1a
d2fo1d1
D:52-114
Class
:
All beta proteins
(24004)
Fold
:
beta-Trefoil
(385)
Superfamily
:
DNA-binding protein LAG-1 (CSL)
(5)
Family
:
DNA-binding protein LAG-1 (CSL)
(4)
Protein domain
:
DNA-binding protein LAG-1 (CSL)
(4)
Nematode (Caenorhabditis elegans) [TaxId: 6239]
(4)
2a
d2fo1a3
A:381-541
Fold
:
Common fold of diphtheria toxin/transcription factors/cytochrome f
(364)
Superfamily
:
p53-like transcription factors
(153)
Family
:
DNA-binding protein LAG-1 (CSL)
(4)
Protein domain
:
DNA-binding protein LAG-1 (CSL)
(4)
Nematode (Caenorhabditis elegans) [TaxId: 6239]
(4)
3a
d2fo1a2
A:196-380
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
E set domains
(509)
Family
:
NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
(56)
Protein domain
:
DNA-binding protein LAG-1 (CSL)
(4)
Nematode (Caenorhabditis elegans) [TaxId: 6239]
(4)
4a
d2fo1a1
A:542-660
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
beta-hairpin-alpha-hairpin repeat
(81)
Superfamily
:
Ankyrin repeat
(79)
Family
:
Ankyrin repeat
(60)
Protein domain
:
Lin-12
(1)
Nematode (Caenorhabditis elegans) [TaxId: 6239]
(1)
5a
d2fo1e1
E:1021-1297
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CATH Domains
(3, 3)
Info
all CATH domains
1a: CATH_2fo1A03 (A:563-663)
2a: CATH_2fo1A01 (A:195-372,A:541-562)
3a: CATH_2fo1A02 (A:380-540)
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Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Immunoglobulins
(2282)
[unclassified]
(54)
1a
2fo1A03
A:563-663
Homologous Superfamily
:
Lin-12 and glp-1 transcriptional regulator; domain 1
(7)
[unclassified]
(4)
2a
2fo1A01
A:195-372,A:541-562
Architecture
:
Trefoil
(289)
Topology
:
Trefoil (Acidic Fibroblast Growth Factor, subunit A)
(289)
Homologous Superfamily
:
[code=2.80.10.50, no name defined]
(289)
[unclassified]
(4)
3a
2fo1A02
A:380-540
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (139 KB)
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