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Getting 'Biological Unit' information from database.
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Getting 'Hetero Component' information from database.
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Getting 'Site' information from database.
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Getting 'PROSITE' information from database.
2FIR
Biol. Unit 1
Info
Asym.Unit (120 KB)
Biol.Unit 1 (111 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF DFPR-VIIA/STF
Authors
:
S. P. Bajaj, A. E. Schmidt, K. Padmanabhan, M. S. Bajaj, D. Prevost, H. Sc
Date
:
30 Dec 05 (Deposition) - 11 Jul 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : H,L,T
Biol. Unit 1: H,L,T (1x)
Keywords
:
Factor Viia, Soluble Tissue Factor, Oxyanion Hole, Serine Protease, Blood Coagulation, Blood Clotting, Hydrolase-Hydrolase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. P. Bajaj, A. E. Schmidt, S. Agah, M. S. Bajaj, K. Padmanabhan
High Resolution Structures Of P-Aminobenzamidine- And Benzamidine-Viia/Soluble Tissue Factor: Unpredicted Conformation Of The 192-193 Peptide Bond And Mapping Of Ca2+, Mg2+, Na+ And Zn2+ Sites In Factor Viia
J. Biol. Chem. V. 281 24873 2006
[
close entry info
]
Hetero Components
(4, 13)
Info
All Hetero Components
1a: D-PHENYLALANYL-N-[(3S)-6-CARBAMIMI... (0G7a)
2a: CALCIUM ION (CAa)
2b: CALCIUM ION (CAb)
2c: CALCIUM ION (CAc)
2d: CALCIUM ION (CAd)
2e: CALCIUM ION (CAe)
2f: CALCIUM ION (CAf)
3a: GAMMA-CARBOXY-GLUTAMIC ACID (CGUa)
3b: GAMMA-CARBOXY-GLUTAMIC ACID (CGUb)
3c: GAMMA-CARBOXY-GLUTAMIC ACID (CGUc)
3d: GAMMA-CARBOXY-GLUTAMIC ACID (CGUd)
3e: GAMMA-CARBOXY-GLUTAMIC ACID (CGUe)
3f: GAMMA-CARBOXY-GLUTAMIC ACID (CGUf)
3g: GAMMA-CARBOXY-GLUTAMIC ACID (CGUg)
3h: GAMMA-CARBOXY-GLUTAMIC ACID (CGUh)
3i: GAMMA-CARBOXY-GLUTAMIC ACID (CGUi)
3j: GAMMA-CARBOXY-GLUTAMIC ACID (CGUj)
4a: CHLORIDE ION (CLa)
4b: CHLORIDE ION (CLb)
4c: CHLORIDE ION (CLc)
5a: ALPHA-L-FUCOSE (FUCa)
6a: ALPHA-D-GLUCOSE (GLCa)
7a: MAGNESIUM ION (MGa)
7b: MAGNESIUM ION (MGb)
7c: MAGNESIUM ION (MGc)
8a: SODIUM ION (NAa)
9a: ZINC ION (ZNa)
9b: ZINC ION (ZNb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
0G7
1
Ligand/Ion
D-PHENYLALANYL-N-[(3S)-6-CARBAMIMIDAMIDO-1-CHLORO-2-OXOHEXAN-3-YL]-L-PROLINAMIDE
2
CA
-1
Ligand/Ion
CALCIUM ION
3
CGU
10
Mod. Amino Acid
GAMMA-CARBOXY-GLUTAMIC ACID
4
CL
-1
Ligand/Ion
CHLORIDE ION
5
FUC
1
Ligand/Ion
ALPHA-L-FUCOSE
6
GLC
1
Ligand/Ion
ALPHA-D-GLUCOSE
7
MG
-1
Ligand/Ion
MAGNESIUM ION
8
NA
-1
Ligand/Ion
SODIUM ION
9
ZN
-1
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(18, 18)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS H:57 , SER H:170H , PRO H:170I , ASP H:189 , SER H:190 , CYS H:191 , LYS H:192 , GLY H:193 , SER H:195 , SER H:214 , TRP H:215 , GLY H:216 , GLN H:217 , GLY H:219 , HOH H:461 , HOH H:478 , CL H:1013
BINDING SITE FOR RESIDUE 0G7 H 701
02
AC2
SOFTWARE
GLN L:49 , SER L:52 , TYR L:68 , HOH L:1132 , HOH L:1136
BINDING SITE FOR RESIDUE GLC L 801
03
AC3
SOFTWARE
GLY L:58 , SER L:60 , PHE L:71 , CYS L:72 , ARG T:131 , PHE T:140
BINDING SITE FOR RESIDUE FUC L 901
04
AC4
SOFTWARE
CGU L:25 , CGU L:29 , HOH L:1054 , HOH L:1150
BINDING SITE FOR RESIDUE MG L 1001
05
AC5
SOFTWARE
CGU L:26 , CGU L:29 , HOH L:1042 , HOH L:1116
BINDING SITE FOR RESIDUE CA L 1002
06
AC6
SOFTWARE
CGU L:29 , HOH L:1036 , HOH L:1042 , HOH L:1171 , HOH L:1172
BINDING SITE FOR RESIDUE CA L 1003
07
AC7
SOFTWARE
CGU L:16 , CGU L:26 , HOH L:1028 , HOH L:1061
BINDING SITE FOR RESIDUE MG L 1004
08
AC8
SOFTWARE
ALA L:1 , CGU L:16 , CGU L:20 , HOH L:1056 , HOH L:1057
BINDING SITE FOR RESIDUE CA L 1005
09
AC9
SOFTWARE
CGU L:6 , CGU L:20 , HOH L:1049 , HOH L:1057 , HOH L:1058
BINDING SITE FOR RESIDUE CA L 1006
10
BC1
SOFTWARE
CGU L:14 , CGU L:19
BINDING SITE FOR RESIDUE MG L 1007
11
BC2
SOFTWARE
ASP L:46 , GLY L:47 , GLN L:49 , ASP L:63 , GLN L:64 , HOH L:1011 , HOH T:1025
BINDING SITE FOR RESIDUE CA L 1008
12
BC3
SOFTWARE
GLU H:70 , ASP H:72 , GLU H:75 , GLU H:80 , HOH H:1133 , HOH H:1134
BINDING SITE FOR RESIDUE CA H 1009
13
BC4
SOFTWARE
TYR H:184 , SER H:185 , ASP H:186 , GLY H:187 , THR H:221 , ALA H:221A , HIS H:224 , HOH H:1198 , HOH H:1290
BINDING SITE FOR RESIDUE NA H 1010
14
BC5
SOFTWARE
HIS H:76 , GLU H:80 , HOH H:1132 , HOH H:1135 , HOH H:1136
BINDING SITE FOR RESIDUE ZN H 1011
15
BC6
SOFTWARE
LYS H:24 , GLY H:69 , HIS H:117 , HOH H:1052
BINDING SITE FOR RESIDUE ZN H 1012
16
BC7
SOFTWARE
GLY H:216 , GLY H:219
BINDING SITE FOR RESIDUE CL H 1013
17
BC8
SOFTWARE
ARG H:84 , HIS H:109
BINDING SITE FOR RESIDUE CL H 1014
18
BC9
SOFTWARE
GLU T:130 , ARG T:144 , TYR T:153 , ASN T:173
BINDING SITE FOR RESIDUE CL T 1015
[
close Site info
]
SAPs(SNPs)/Variants
(112, 112)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
001: VAR_015135 (F4L, chain L, )
002: VAR_014405 (L13Q, chain L, )
003: VAR_015138 (G19D, chain H, )
004: VAR_014406 (E19Q, chain L, )
005: VAR_065370 (C22F, chain L, )
006: VAR_065371 (C22R, chain L, )
007: VAR_065373 (E25K, chain L, )
008: VAR_065374 (R28G, chain L, )
009: VAR_065375 (R28P, chain L, )
010: VAR_006506 (C42Y, chain H, )
011: VAR_065387 (G44R, chain H, )
012: VAR_014413 (T45N, chain H, )
013: VAR_065388 (S54F, chain H, )
014: VAR_065389 (A55P, chain H, )
015: VAR_065390 (A55T, chain H, )
016: VAR_065376 (N57D, chain L, )
017: VAR_065391 (C58R, chain H, )
018: VAR_015139 (C58Y, chain H, )
019: VAR_015136 (S60P, chain L, )
020: VAR_014407 (C61F, chain L, )
021: VAR_065392 (L64P, chain H, )
022: VAR_014408 (L65P, chain L, )
023: VAR_015140 (A66T, chain H, )
024: VAR_014409 (Y68C, chain L, )
025: VAR_065393 (D72N, chain H, )
026: VAR_065394 (D77N, chain H, )
027: VAR_065377 (G78D, chain L, )
028: VAR_006497 (R79K, chain L, )
029: VAR_006498 (R79Q, chain L, )
030: VAR_006499 (R79W, chain L, )
031: VAR_006507 (R83W, chain H, )
032: VAR_014410 (C91S, chain L, )
033: VAR_015137 (E94K, chain L, )
034: VAR_013936 (V95D, chain H, )
035: VAR_065378 (G96S, chain L, )
036: VAR_006501 (G97C, chain L, )
037: VAR_006500 (G97S, chain L, )
038: VAR_014411 (G97V, chain L, )
039: VAR_065395 (T98I, chain H, )
040: VAR_006502 (Q100R, chain L, )
041: VAR_065396 (H101Q, chain H, )
042: VAR_014414 (D102H, chain H, )
043: VAR_014415 (D102N, chain H, )
044: VAR_014416 (A104T, chain H, )
045: VAR_006508 (A104V, chain H, )
046: VAR_014417 (R107C, chain H, )
047: VAR_006509 (R107H, chain H, )
048: VAR_065379 (S111F, chain L, )
049: VAR_015141 (V112M, chain H, )
050: VAR_014299 (I113V, chain T, )
051: VAR_065397 (L114V, chain H, )
052: VAR_065380 (G117R, chain L, )
053: VAR_065398 (L121F, chain H, )
054: VAR_065381 (L121P, chain L, )
055: VAR_065382 (D123N, chain L, )
056: VAR_065399 (L123R, chain H, )
057: VAR_006510 (E125K, chain H, )
058: VAR_065383 (S126F, chain L, )
059: VAR_065400 (R126Q, chain H, )
060: VAR_065384 (P129S, chain L, )
061: VAR_012008 (R131W, chain T, )
062: VAR_065401 (R134C, chain H, )
063: VAR_065385 (P134L, chain L, )
064: VAR_006503 (P134T, chain L, )
065: VAR_014412 (C135R, chain L, )
066: VAR_006504 (K137E, chain L, )
067: VAR_015142 (V138F, chain H, )
068: VAR_065386 (I138T, chain L, )
069: VAR_065402 (G140S, chain H, )
070: VAR_065403 (W141R, chain H, )
071: VAR_065404 (G142S, chain H, )
072: VAR_065405 (R147C, chain H, )
073: VAR_013122 (A150T, chain H, )
074: VAR_006511 (A152V, chain H, )
075: VAR_006512 (M156I, chain H, )
076: VAR_006513 (M156V, chain H, )
077: VAR_065406 (L158P, chain H, )
078: VAR_065407 (P161H, chain H, )
079: VAR_015143 (P161R, chain H, )
080: VAR_006514 (R162Q, chain H, )
081: VAR_065408 (R162W, chain H, )
082: VAR_018671 (T165S, chain H, )
083: VAR_006515 (C168F, chain H, )
084: VAR_065410 (T177M, chain H, )
085: VAR_065411 (M180T, chain H, )
086: VAR_065412 (M180V, chain H, )
087: VAR_065413 (F181S, chain H, )
088: VAR_014392 (C182G, chain H, )
089: VAR_065415 (D189E, chain H, )
090: VAR_065416 (K192E, chain H, )
091: VAR_006517 (G193E, chain H, )
092: VAR_006516 (G193R, chain H, )
093: VAR_015144 (D194H, chain H, )
094: VAR_065417 (S195N, chain H, )
095: VAR_065418 (H199Q, chain H, )
096: VAR_065419 (H199R, chain H, )
097: VAR_065420 (R204G, chain H, )
098: VAR_006518 (R204Q, chain H, )
099: VAR_065421 (G205C, chain H, )
100: VAR_006519 (T210M, chain H, )
101: VAR_065422 (V213F, chain H, )
102: VAR_065423 (G216A, chain H, )
103: VAR_065424 (G216C, chain H, )
104: VAR_065426 (G223D, chain H, )
105: VAR_014420 (G226E, chain H, )
106: VAR_065427 (Y228F, chain H, )
107: VAR_013123 (E236K, chain H, )
108: VAR_014418 (T129CM, chain H, )
109: VAR_065409 (R170CW, chain H, )
110: VAR_065414 (G184AC, chain H, )
111: VAR_014419 (G184AS, chain H, )
112: VAR_065425 (A221AT, chain H, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
001
UniProt
VAR_015135
F
64
L
FA7_HUMAN
Disease (FA7D)
---
L
F
4
L
002
UniProt
VAR_014405
L
73
Q
FA7_HUMAN
Disease (FA7D)
45572939
L
L
13
Q
003
UniProt
VAR_015138
G
216
D
FA7_HUMAN
Disease (FA7D)
---
H
G
19
D
004
UniProt
VAR_014406
E
79
Q
FA7_HUMAN
Disease (FA7D)
---
L
E
19
Q
005
UniProt
VAR_065370
C
82
F
FA7_HUMAN
Disease (FA7D)
---
L
C
22
F
006
UniProt
VAR_065371
C
82
R
FA7_HUMAN
Disease (FA7D)
---
L
C
22
R
007
UniProt
VAR_065373
E
85
K
FA7_HUMAN
Disease (FA7D)
---
L
E
25
K
008
UniProt
VAR_065374
R
88
G
FA7_HUMAN
Disease (FA7D)
---
L
R
28
G
009
UniProt
VAR_065375
R
88
P
FA7_HUMAN
Disease (FA7D)
---
L
R
28
P
010
UniProt
VAR_006506
C
238
Y
FA7_HUMAN
Disease (FA7D)
---
H
C
42
Y
011
UniProt
VAR_065387
G
240
R
FA7_HUMAN
Disease (FA7D)
---
H
G
44
R
012
UniProt
VAR_014413
T
241
N
FA7_HUMAN
Disease (FA7D)
---
H
T
45
N
013
UniProt
VAR_065388
S
250
F
FA7_HUMAN
Disease (FA7D)
---
H
S
54
F
014
UniProt
VAR_065389
A
251
P
FA7_HUMAN
Disease (FA7D)
---
H
A
55
P
015
UniProt
VAR_065390
A
251
T
FA7_HUMAN
Disease (FA7D)
---
H
A
55
T
016
UniProt
VAR_065376
N
117
D
FA7_HUMAN
Disease (FA7D)
---
L
N
57
D
017
UniProt
VAR_065391
C
254
R
FA7_HUMAN
Disease (FA7D)
---
H
C
58
R
018
UniProt
VAR_015139
C
254
Y
FA7_HUMAN
Disease (FA7D)
---
H
C
58
Y
019
UniProt
VAR_015136
S
120
P
FA7_HUMAN
Disease (FA7D)
---
L
S
60
P
020
UniProt
VAR_014407
C
121
F
FA7_HUMAN
Disease (FA7D)
---
L
C
61
F
021
UniProt
VAR_065392
L
264
P
FA7_HUMAN
Disease (FA7D)
---
H
L
64
P
022
UniProt
VAR_014408
L
125
P
FA7_HUMAN
Disease (FA7D)
---
L
L
65
P
023
UniProt
VAR_015140
A
266
T
FA7_HUMAN
Disease (FA7D)
---
H
A
66
T
024
UniProt
VAR_014409
Y
128
C
FA7_HUMAN
Disease (FA7D)
---
L
Y
68
C
025
UniProt
VAR_065393
D
272
N
FA7_HUMAN
Disease (FA7D)
---
H
D
72
N
026
UniProt
VAR_065394
D
277
N
FA7_HUMAN
Disease (FA7D)
---
H
D
77
N
027
UniProt
VAR_065377
G
138
D
FA7_HUMAN
Disease (FA7D)
---
L
G
78
D
028
UniProt
VAR_006497
R
139
K
FA7_HUMAN
Disease (FA7D)
---
L
R
79
K
029
UniProt
VAR_006498
R
139
Q
FA7_HUMAN
Disease (FA7D)
150525536
L
R
79
Q
030
UniProt
VAR_006499
R
139
W
FA7_HUMAN
Disease (FA7D)
---
L
R
79
W
031
UniProt
VAR_006507
R
283
W
FA7_HUMAN
Disease (FA7D)
---
H
R
83
W
032
UniProt
VAR_014410
C
151
S
FA7_HUMAN
Disease (FA7D)
---
L
C
91
S
033
UniProt
VAR_015137
E
154
K
FA7_HUMAN
Disease (FA7D)
146795869
L
E
94
K
034
UniProt
VAR_013936
V
295
D
FA7_HUMAN
Polymorphism
6045
H
V
95
D
035
UniProt
VAR_065378
G
156
S
FA7_HUMAN
Disease (FA7D)
---
L
G
96
S
036
UniProt
VAR_006501
G
157
C
FA7_HUMAN
Disease (FA7D)
---
L
G
97
C
037
UniProt
VAR_006500
G
157
S
FA7_HUMAN
Disease (FA7D)
---
L
G
97
S
038
UniProt
VAR_014411
G
157
V
FA7_HUMAN
Disease (FA7D)
---
L
G
97
V
039
UniProt
VAR_065395
T
298
I
FA7_HUMAN
Disease (FA7D)
---
H
T
98
I
040
UniProt
VAR_006502
Q
160
R
FA7_HUMAN
Disease (FA7D)
---
L
Q
100
R
041
UniProt
VAR_065396
H
301
Q
FA7_HUMAN
Disease (FA7D)
---
H
H
101
Q
042
UniProt
VAR_014414
D
302
H
FA7_HUMAN
Disease (FA7D)
---
H
D
102
H
043
UniProt
VAR_014415
D
302
N
FA7_HUMAN
Disease (FA7D)
---
H
D
102
N
044
UniProt
VAR_014416
A
304
T
FA7_HUMAN
Disease (FA7D)
---
H
A
104
T
045
UniProt
VAR_006508
A
304
V
FA7_HUMAN
Disease (FA7D)
---
H
A
104
V
046
UniProt
VAR_014417
R
307
C
FA7_HUMAN
Disease (FA7D)
---
H
R
107
C
047
UniProt
VAR_006509
R
307
H
FA7_HUMAN
Disease (FA7D)
---
H
R
107
H
048
UniProt
VAR_065379
S
171
F
FA7_HUMAN
Disease (FA7D)
---
L
S
111
F
049
UniProt
VAR_015141
V
312
M
FA7_HUMAN
Disease (FA7D)
---
H
V
112
M
050
UniProt
VAR_014299
I
145
V
TF_HUMAN
Polymorphism
3917627
T
I
113
V
051
UniProt
VAR_065397
L
314
V
FA7_HUMAN
Disease (FA7D)
---
H
L
114
V
052
UniProt
VAR_065380
G
177
R
FA7_HUMAN
Disease (FA7D)
---
L
G
117
R
053
UniProt
VAR_065398
L
321
F
FA7_HUMAN
Disease (FA7D)
---
H
L
121
F
054
UniProt
VAR_065381
L
181
P
FA7_HUMAN
Disease (FA7D)
---
L
L
121
P
055
UniProt
VAR_065382
D
183
N
FA7_HUMAN
Disease (FA7D)
---
L
D
123
N
056
UniProt
VAR_065399
L
323
R
FA7_HUMAN
Disease (FA7D)
---
H
L
123
R
057
UniProt
VAR_006510
E
325
K
FA7_HUMAN
Disease (FA7D)
---
H
E
125
K
058
UniProt
VAR_065383
S
186
F
FA7_HUMAN
Disease (FA7D)
---
L
S
126
F
059
UniProt
VAR_065400
R
326
Q
FA7_HUMAN
Disease (FA7D)
---
H
R
126
Q
060
UniProt
VAR_065384
P
189
S
FA7_HUMAN
Disease (FA7D)
---
L
P
129
S
061
UniProt
VAR_012008
R
163
W
TF_HUMAN
Polymorphism
5901
T
R
131
W
062
UniProt
VAR_065401
R
337
C
FA7_HUMAN
Disease (FA7D)
---
H
R
134
C
063
UniProt
VAR_065385
P
194
L
FA7_HUMAN
Disease (FA7D)
---
L
P
134
L
064
UniProt
VAR_006503
P
194
T
FA7_HUMAN
Disease (FA7D)
---
L
P
134
T
065
UniProt
VAR_014412
C
195
R
FA7_HUMAN
Disease (FA7D)
---
L
C
135
R
066
UniProt
VAR_006504
K
197
E
FA7_HUMAN
Disease (FA7D)
---
L
K
137
E
067
UniProt
VAR_015142
V
341
F
FA7_HUMAN
Disease (FA7D)
---
H
V
138
F
068
UniProt
VAR_065386
I
198
T
FA7_HUMAN
Disease (FA7D)
---
L
I
138
T
069
UniProt
VAR_065402
G
343
S
FA7_HUMAN
Disease (FA7D)
---
H
G
140
S
070
UniProt
VAR_065403
W
344
R
FA7_HUMAN
Disease (FA7D)
---
H
W
141
R
071
UniProt
VAR_065404
G
345
S
FA7_HUMAN
Disease (FA7D)
---
H
G
142
S
072
UniProt
VAR_065405
R
350
C
FA7_HUMAN
Disease (FA7D)
---
H
R
147
C
073
UniProt
VAR_013122
A
352
T
FA7_HUMAN
Polymorphism
3093267
H
A
150
T
074
UniProt
VAR_006511
A
354
V
FA7_HUMAN
Disease (FA7D)
36209567
H
A
152
V
075
UniProt
VAR_006512
M
358
I
FA7_HUMAN
Disease (FA7D)
---
H
M
156
I
076
UniProt
VAR_006513
M
358
V
FA7_HUMAN
Disease (FA7D)
---
H
M
156
V
077
UniProt
VAR_065406
L
360
P
FA7_HUMAN
Disease (FA7D)
---
H
L
158
P
078
UniProt
VAR_065407
P
363
H
FA7_HUMAN
Disease (FA7D)
---
H
P
161
H
079
UniProt
VAR_015143
P
363
R
FA7_HUMAN
Disease (FA7D)
---
H
P
161
R
080
UniProt
VAR_006514
R
364
Q
FA7_HUMAN
Disease (FA7D)
121964926
H
R
162
Q
081
UniProt
VAR_065408
R
364
W
FA7_HUMAN
Disease (FA7D)
---
H
R
162
W
082
UniProt
VAR_018671
T
367
S
FA7_HUMAN
Polymorphism
---
H
T
165
S
083
UniProt
VAR_006515
C
370
F
FA7_HUMAN
Disease (FA7D)
---
H
C
168
F
084
UniProt
VAR_065410
T
384
M
FA7_HUMAN
Disease (FA7D)
---
H
T
177
M
085
UniProt
VAR_065411
M
387
T
FA7_HUMAN
Disease (FA7D)
---
H
M
180
T
086
UniProt
VAR_065412
M
387
V
FA7_HUMAN
Disease (FA7D)
---
H
M
180
V
087
UniProt
VAR_065413
F
388
S
FA7_HUMAN
Disease (FA7D)
---
H
F
181
S
088
UniProt
VAR_014392
C
389
G
FA7_HUMAN
Disease (FA7D)
---
H
C
182
G
089
UniProt
VAR_065415
D
398
E
FA7_HUMAN
Disease (FA7D)
---
H
D
189
E
090
UniProt
VAR_065416
K
401
E
FA7_HUMAN
Disease (FA7D)
---
H
K
192
E
091
UniProt
VAR_006517
G
402
E
FA7_HUMAN
Disease (FA7D)
---
H
G
193
E
092
UniProt
VAR_006516
G
402
R
FA7_HUMAN
Disease (FA7D)
---
H
G
193
R
093
UniProt
VAR_015144
D
403
H
FA7_HUMAN
Disease (FA7D)
---
H
D
194
H
094
UniProt
VAR_065417
S
404
N
FA7_HUMAN
Disease (FA7D)
---
H
S
195
N
095
UniProt
VAR_065418
H
408
Q
FA7_HUMAN
Disease (FA7D)
121964936
H
H
199
Q
096
UniProt
VAR_065419
H
408
R
FA7_HUMAN
Disease (FA7D)
---
H
H
199
R
097
UniProt
VAR_065420
R
413
G
FA7_HUMAN
Disease (FA7D)
---
H
R
204
G
098
UniProt
VAR_006518
R
413
Q
FA7_HUMAN
Polymorphism
6046
H
R
204
Q
099
UniProt
VAR_065421
G
414
C
FA7_HUMAN
Disease (FA7D)
---
H
G
205
C
100
UniProt
VAR_006519
T
419
M
FA7_HUMAN
Disease (FA7D)
---
H
T
210
M
101
UniProt
VAR_065422
V
422
F
FA7_HUMAN
Disease (FA7D)
---
H
V
213
F
102
UniProt
VAR_065423
G
425
A
FA7_HUMAN
Disease (FA7D)
---
H
G
216
A
103
UniProt
VAR_065424
G
425
C
FA7_HUMAN
Disease (FA7D)
---
H
G
216
C
104
UniProt
VAR_065426
G
432
D
FA7_HUMAN
Disease (FA7D)
---
H
G
223
D
105
UniProt
VAR_014420
G
435
E
FA7_HUMAN
Disease (FA7D)
---
H
G
226
E
106
UniProt
VAR_065427
Y
437
F
FA7_HUMAN
Disease (FA7D)
---
H
Y
228
F
107
UniProt
VAR_013123
E
445
K
FA7_HUMAN
Polymorphism
3093248
H
E
236
K
108
UniProt
VAR_014418
T
332
M
FA7_HUMAN
Disease (FA7D)
---
H
T
129C
M
109
UniProt
VAR_065409
R
375
W
FA7_HUMAN
Disease (FA7D)
137919286
H
R
170C
W
110
UniProt
VAR_065414
G
391
C
FA7_HUMAN
Disease (FA7D)
---
H
G
184A
C
111
UniProt
VAR_014419
G
391
S
FA7_HUMAN
Disease (FA7D)
190485816
H
G
184A
S
112
UniProt
VAR_065425
A
429
T
FA7_HUMAN
Disease (FA7D)
---
H
A
221A
T
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(10, 10)
Info
All PROSITE Patterns/Profiles
01: GLA_1 (L:16-41)
02: TISSUE_FACTOR (T:45-62)
03: EGF_3 (L:46-82)
04: EGF_CA (L:46-70)
05: ASX_HYDROXYL (L:61-72)
06: EGF_1 (L:70-81)
07: EGF_2 (L:112-127)
08: TRYPSIN_DOM (H:16-243)
09: TRYPSIN_HIS (H:53-58)
10: TRYPSIN_SER (H:189-200)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GLA_1
PS00011
Vitamin K-dependent carboxylation domain.
FA7_HUMAN
76-101
1
L:16-41
2
TISSUE_FACTOR
PS00621
Tissue factor signature.
TF_HUMAN
77-94
1
T:45-62
3
EGF_3
PS50026
EGF-like domain profile.
FA7_HUMAN
106-142
1
L:46-82
4
EGF_CA
PS01187
Calcium-binding EGF-like domain signature.
FA7_HUMAN
106-130
1
L:46-70
5
ASX_HYDROXYL
PS00010
Aspartic acid and asparagine hydroxylation site.
FA7_HUMAN
121-132
1
L:61-72
6
EGF_1
PS00022
EGF-like domain signature 1.
FA7_HUMAN
130-141
1
L:70-81
7
EGF_2
PS01186
EGF-like domain signature 2.
FA7_HUMAN
172-187
1
L:112-127
8
TRYPSIN_DOM
PS50240
Serine proteases, trypsin domain profile.
FA7_HUMAN
213-452
1
H:16-243
9
TRYPSIN_HIS
PS00134
Serine proteases, trypsin family, histidine active site.
FA7_HUMAN
249-254
1
H:53-58
10
TRYPSIN_SER
PS00135
Serine proteases, trypsin family, serine active site.
FA7_HUMAN
398-409
1
H:189-200
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
View:
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Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(4, 6)
Info
All SCOP Domains
1a: SCOP_d2firt1 (T:6-106)
1b: SCOP_d2firt2 (T:107-210)
2a: SCOP_d2firh_ (H:)
3a: SCOP_d2firl3 (L:1-48)
4a: SCOP_d2firl1 (L:49-86)
4b: SCOP_d2firl2 (L:87-142)
View:
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Classes
(
)
(
)
Folds
(
)
(
)
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(
)
(
)
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(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Fibronectin type III
(212)
Family
:
Fibronectin type III
(180)
Protein domain
:
Extracellular region of human tissue factor
(33)
Human (Homo sapiens) [TaxId: 9606]
(32)
1a
d2firt1
T:6-106
1b
d2firt2
T:107-210
Fold
:
Trypsin-like serine proteases
(1752)
Superfamily
:
Trypsin-like serine proteases
(1752)
Family
:
Eukaryotic proteases
(1343)
Protein domain
:
Coagulation factor VIIa
(39)
Human (Homo sapiens) [TaxId: 9606]
(39)
2a
d2firh_
H:
Class
:
Small proteins
(3458)
Fold
:
GLA-domain
(44)
Superfamily
:
GLA-domain
(44)
Family
:
GLA-domain
(37)
Protein domain
:
Coagulation factor VIIa
(16)
Human (Homo sapiens) [TaxId: 9606]
(16)
3a
d2firl3
L:1-48
Fold
:
Knottins (small inhibitors, toxins, lectins)
(761)
Superfamily
:
EGF/Laminin
(347)
Family
:
EGF-type module
(304)
Protein domain
:
Coagulation factor VIIa
(45)
Human (Homo sapiens) [TaxId: 9606]
(45)
4a
d2firl1
L:49-86
4b
d2firl2
L:87-142
[
close SCOP info
]
CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_2firH01 (H:16-27,H:121-232)
1b: CATH_2firH02 (H:28-120,H:233-246)
2a: CATH_2firT01 (T:6-105)
2b: CATH_2firT02 (T:106-210)
View:
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Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Thrombin, subunit H
(1535)
Homologous Superfamily
:
Trypsin-like serine proteases
(1488)
Human (Homo sapiens)
(615)
1a
2firH01
H:16-27,H:121-232
1b
2firH02
H:28-120,H:233-246
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Immunoglobulins
(2282)
Human (Homo sapiens)
(912)
2a
2firT01
T:6-105
2b
2firT02
T:106-210
[
close CATH info
]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
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Atom Selection
(currently selected atoms:
all
)
Protein
Nucleic
Backbone
Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain H
Chain L
Chain T
Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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select non-helix/non-sheet protein parts
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set label size to 20 (allowed range: 1-58)
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show SS bonds with a radius of 100 units (=0.4Å)
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