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2FHH
Asym. Unit
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Asym.Unit (930 KB)
Biol.Unit 1 (912 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS PROTEASOME IN COMPLEX WITH A PEPTIDYL BORONATE INHIBITOR MLN-273
Authors
:
H. Li
Date
:
23 Dec 05 (Deposition) - 28 Feb 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.99
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,1,2
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,1,2 (1x)
Keywords
:
Multi-Subunit Protein Assembly, Inhibitor-Complex, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. Hu, G. Lin, M. Wang, L. Dick, R. M. Xu, C. Nathan, H. Li
Structure Of The Mycobacterium Tuberculosis Proteasome And Mechanism Of Inhibition By A Peptidyl Boronate.
Mol. Microbiol. V. 59 1417 2006
[
close entry info
]
Hetero Components
(1, 14)
Info
All Hetero Components
1a: (1R)-3-METHYL-1-{[N-(MORPHOLIN-4-Y... (M1Na)
1b: (1R)-3-METHYL-1-{[N-(MORPHOLIN-4-Y... (M1Nb)
1c: (1R)-3-METHYL-1-{[N-(MORPHOLIN-4-Y... (M1Nc)
1d: (1R)-3-METHYL-1-{[N-(MORPHOLIN-4-Y... (M1Nd)
1e: (1R)-3-METHYL-1-{[N-(MORPHOLIN-4-Y... (M1Ne)
1f: (1R)-3-METHYL-1-{[N-(MORPHOLIN-4-Y... (M1Nf)
1g: (1R)-3-METHYL-1-{[N-(MORPHOLIN-4-Y... (M1Ng)
1h: (1R)-3-METHYL-1-{[N-(MORPHOLIN-4-Y... (M1Nh)
1i: (1R)-3-METHYL-1-{[N-(MORPHOLIN-4-Y... (M1Ni)
1j: (1R)-3-METHYL-1-{[N-(MORPHOLIN-4-Y... (M1Nj)
1k: (1R)-3-METHYL-1-{[N-(MORPHOLIN-4-Y... (M1Nk)
1l: (1R)-3-METHYL-1-{[N-(MORPHOLIN-4-Y... (M1Nl)
1m: (1R)-3-METHYL-1-{[N-(MORPHOLIN-4-Y... (M1Nm)
1n: (1R)-3-METHYL-1-{[N-(MORPHOLIN-4-Y... (M1Nn)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
M1N
14
Ligand/Ion
(1R)-3-METHYL-1-{[N-(MORPHOLIN-4-YLCARBONYL)-3-(1-NAPHTHYL)-D-ALANYL]AMINO}BUTYLBORONIC ACID
[
close Hetero Component info
]
Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
THR H:301 , THR H:321 , GLN H:322 , SER H:327 , VAL H:331 , LYS H:333 , ALA H:346 , GLY H:347 , THR H:348 , ALA H:349 , ALA H:352 , HOH H:542 , HOH H:550 , ASP P:424
BINDING SITE FOR RESIDUE M1N H 273
02
AC2
SOFTWARE
THR C:301 , SER C:320 , THR C:321 , GLN C:322 , SER C:327 , ALA C:346 , GLY C:347 , THR C:348 , ALA C:349 , ALA C:352 , HOH C:545 , ASP H:424
BINDING SITE FOR RESIDUE M1N C 273
03
AC3
SOFTWARE
THR E:301 , SER E:320 , THR E:321 , GLN E:322 , SER E:327 , ALA E:346 , GLY E:347 , THR E:348 , ALA E:349 , ALA E:352 , ASP R:424
BINDING SITE FOR RESIDUE M1N E 273
04
AC4
SOFTWARE
HOH G:153 , THR G:301 , THR G:321 , GLN G:322 , SER G:327 , VAL G:331 , ALA G:346 , GLY G:347 , THR G:348 , ALA G:349 , ALA G:352 , ASP N:424
BINDING SITE FOR RESIDUE M1N G 273
05
AC5
SOFTWARE
ASP C:424 , THR J:301 , SER J:320 , THR J:321 , GLN J:322 , SER J:327 , LYS J:333 , ALA J:346 , GLY J:347 , THR J:348 , ALA J:349 , ALA J:352
BINDING SITE FOR RESIDUE M1N J 273
06
AC6
SOFTWARE
ASP E:424 , THR L:301 , SER L:320 , THR L:321 , GLN L:322 , SER L:327 , ALA L:346 , GLY L:347 , THR L:348 , ALA L:349 , ALA L:352 , HOH L:545
BINDING SITE FOR RESIDUE M1N L 273
07
AC7
SOFTWARE
ASP L:424 , THR N:301 , SER N:320 , THR N:321 , GLN N:322 , SER N:327 , ILE N:345 , ALA N:346 , GLY N:347 , THR N:348 , ALA N:349 , ALA N:352 , HOH N:543
BINDING SITE FOR RESIDUE M1N N 273
08
AC8
SOFTWARE
THR P:301 , SER P:320 , THR P:321 , GLN P:322 , SER P:327 , LYS P:333 , ALA P:346 , GLY P:347 , THR P:348 , ALA P:349 , ALA P:352 , ASP V:424
BINDING SITE FOR RESIDUE M1N P 273
09
AC9
SOFTWARE
HOH R:10 , HOH R:45 , THR R:301 , SER R:320 , THR R:321 , GLN R:322 , SER R:327 , ALA R:346 , GLY R:347 , ALA R:349 , ALA R:352 , ASP Z:424
BINDING SITE FOR RESIDUE M1N R 273
10
BC1
SOFTWARE
ASP J:424 , THR T:301 , THR T:321 , GLN T:322 , SER T:327 , ALA T:346 , GLY T:347 , THR T:348 , ALA T:349 , ALA T:352
BINDING SITE FOR RESIDUE M1N T 273
11
BC2
SOFTWARE
ASP 2:424 , THR V:301 , SER V:320 , THR V:321 , GLN V:322 , SER V:327 , VAL V:331 , ALA V:346 , GLY V:347 , THR V:348 , ALA V:349 , ALA V:352
BINDING SITE FOR RESIDUE M1N V 273
12
BC3
SOFTWARE
ASP G:424 , THR X:301 , SER X:320 , THR X:321 , GLN X:322 , SER X:327 , VAL X:331 , ALA X:346 , GLY X:347 , THR X:348 , ALA X:349 , ALA X:352
BINDING SITE FOR RESIDUE M1N X 273
13
BC4
SOFTWARE
ASP X:424 , THR Z:301 , SER Z:320 , THR Z:321 , GLN Z:322 , SER Z:327 , ILE Z:345 , ALA Z:346 , GLY Z:347 , THR Z:348 , ALA Z:349 , ALA Z:352
BINDING SITE FOR RESIDUE M1N Z 273
14
BC5
SOFTWARE
THR 2:301 , ARG 2:319 , SER 2:320 , THR 2:321 , GLN 2:322 , SER 2:327 , LYS 2:333 , ILE 2:345 , ALA 2:346 , GLY 2:347 , THR 2:348 , ALA 2:349 , ALA 2:352 , HOH 2:543 , HOH 2:546 , ASP T:424
BINDING SITE FOR RESIDUE M1N 2 273
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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]
PROSITE Patterns/Profiles
(1, 14)
Info
All PROSITE Patterns/Profiles
1: PROTEASOME_ALPHA_2 (1:16-234,A:16-234,B:16-234,D:16-23...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEASOME_ALPHA_2
PS51475
Proteasome alpha-type subunit profile.
PSA_MYCTU
16-234
14
1:16-234
A:16-234
B:16-234
D:16-234
F:16-234
I:16-234
K:16-234
M:16-234
O:16-234
Q:16-234
S:16-234
U:16-234
W:16-234
Y:16-234
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 28)
Info
All SCOP Domains
1a: SCOP_d2fhh1_ (1:)
1b: SCOP_d2fhh2_ (2:)
1c: SCOP_d2fhha_ (A:)
1d: SCOP_d2fhhb_ (B:)
1e: SCOP_d2fhhc_ (C:)
1f: SCOP_d2fhhd_ (D:)
1g: SCOP_d2fhhe_ (E:)
1h: SCOP_d2fhhf_ (F:)
1i: SCOP_d2fhhg_ (G:)
1j: SCOP_d2fhhh_ (H:)
1k: SCOP_d2fhhi_ (I:)
1l: SCOP_d2fhhj_ (J:)
1m: SCOP_d2fhhk_ (K:)
1n: SCOP_d2fhhl_ (L:)
1o: SCOP_d2fhhm_ (M:)
1p: SCOP_d2fhhn_ (N:)
1q: SCOP_d2fhho_ (O:)
1r: SCOP_d2fhhp_ (P:)
1s: SCOP_d2fhhq_ (Q:)
1t: SCOP_d2fhhr_ (R:)
1u: SCOP_d2fhhs_ (S:)
1v: SCOP_d2fhht_ (T:)
1w: SCOP_d2fhhu_ (U:)
1x: SCOP_d2fhhv_ (V:)
1y: SCOP_d2fhhw_ (W:)
1z: SCOP_d2fhhx_ (X:)
1aa: SCOP_d2fhhy_ (Y:)
1ab: SCOP_d2fhhz_ (Z:)
View:
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ntn hydrolase-like
(356)
Superfamily
:
N-terminal nucleophile aminohydrolases (Ntn hydrolases)
(352)
Family
:
Proteasome subunits
(222)
Protein domain
:
automated matches
(78)
Mycobacterium tuberculosis [TaxId: 1773]
(9)
1a
d2fhh1_
1:
1b
d2fhh2_
2:
1c
d2fhha_
A:
1d
d2fhhb_
B:
1e
d2fhhc_
C:
1f
d2fhhd_
D:
1g
d2fhhe_
E:
1h
d2fhhf_
F:
1i
d2fhhg_
G:
1j
d2fhhh_
H:
1k
d2fhhi_
I:
1l
d2fhhj_
J:
1m
d2fhhk_
K:
1n
d2fhhl_
L:
1o
d2fhhm_
M:
1p
d2fhhn_
N:
1q
d2fhho_
O:
1r
d2fhhp_
P:
1s
d2fhhq_
Q:
1t
d2fhhr_
R:
1u
d2fhhs_
S:
1v
d2fhht_
T:
1w
d2fhhu_
U:
1x
d2fhhv_
V:
1y
d2fhhw_
W:
1z
d2fhhx_
X:
1aa
d2fhhy_
Y:
1ab
d2fhhz_
Z:
[
close SCOP info
]
CATH Domains
(1, 28)
Info
all CATH domains
1a: CATH_2fhh100 (1:8-237)
1b: CATH_2fhhA00 (A:8-237)
1c: CATH_2fhhB00 (B:8-237)
1d: CATH_2fhhD00 (D:8-237)
1e: CATH_2fhhF00 (F:8-237)
1f: CATH_2fhhI00 (I:8-237)
1g: CATH_2fhhK00 (K:8-237)
1h: CATH_2fhhM00 (M:8-237)
1i: CATH_2fhhO00 (O:8-237)
1j: CATH_2fhhQ00 (Q:8-237)
1k: CATH_2fhhS00 (S:8-237)
1l: CATH_2fhhU00 (U:8-237)
1m: CATH_2fhhW00 (W:8-237)
1n: CATH_2fhhY00 (Y:8-237)
1o: CATH_2fhh200 (2:301-522)
1p: CATH_2fhhC00 (C:301-522)
1q: CATH_2fhhE00 (E:301-522)
1r: CATH_2fhhG00 (G:301-522)
1s: CATH_2fhhH00 (H:301-522)
1t: CATH_2fhhJ00 (J:301-522)
1u: CATH_2fhhL00 (L:301-522)
1v: CATH_2fhhN00 (N:301-522)
1w: CATH_2fhhP00 (P:301-522)
1x: CATH_2fhhR00 (R:301-522)
1y: CATH_2fhhT00 (T:301-522)
1z: CATH_2fhhV00 (V:301-522)
1aa: CATH_2fhhX00 (X:301-522)
1ab: CATH_2fhhZ00 (Z:301-522)
View:
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)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
4-Layer Sandwich
(459)
Topology
:
Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
(128)
Homologous Superfamily
:
Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
(124)
Mycobacterium tuberculosis. Organism_taxid: 1773.
(6)
1a
2fhh100
1:8-237
1b
2fhhA00
A:8-237
1c
2fhhB00
B:8-237
1d
2fhhD00
D:8-237
1e
2fhhF00
F:8-237
1f
2fhhI00
I:8-237
1g
2fhhK00
K:8-237
1h
2fhhM00
M:8-237
1i
2fhhO00
O:8-237
1j
2fhhQ00
Q:8-237
1k
2fhhS00
S:8-237
1l
2fhhU00
U:8-237
1m
2fhhW00
W:8-237
1n
2fhhY00
Y:8-237
1o
2fhh200
2:301-522
1p
2fhhC00
C:301-522
1q
2fhhE00
E:301-522
1r
2fhhG00
G:301-522
1s
2fhhH00
H:301-522
1t
2fhhJ00
J:301-522
1u
2fhhL00
L:301-522
1v
2fhhN00
N:301-522
1w
2fhhP00
P:301-522
1x
2fhhR00
R:301-522
1y
2fhhT00
T:301-522
1z
2fhhV00
V:301-522
1aa
2fhhX00
X:301-522
1ab
2fhhZ00
Z:301-522
[
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Pfam Domains
(0, 0)
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all PFAM domains
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Asym.Unit (930 KB)
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