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2FGF
Asym. Unit
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Asym.Unit (27 KB)
Biol.Unit 1 (23 KB)
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(1)
Title
:
THREE-DIMENSIONAL STRUCTURE OF HUMAN BASIC FIBROBLAST GROWTH FACTOR, A STRUCTURAL HOMOLOG OF INTERLEUKIN 1BETA
Authors
:
J. Zhang, S. R. Sprang
Date
:
19 Feb 91 (Deposition) - 15 Jan 92 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.77
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Growth Factor
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. D. Zhang, L. S. Cousens, P. J. Barr, S. R. Sprang
Three-Dimensional Structure Of Human Basic Fibroblast Growth Factor, A Structural Homolog Of Interleukin 1 Beta.
Proc. Natl. Acad. Sci. Usa V. 88 3446 1991
(for further references see the
PDB file header
)
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Hetero Components
(1, 3)
Info
All Hetero Components
1a: SULFATE ION (SO4a)
1b: SULFATE ION (SO4b)
1c: SULFATE ION (SO4c)
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Label:
No.
Name
Count
Type
Full Name
1
SO4
3
Ligand/Ion
SULFATE ION
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN A:27 , LYS A:119 , ARG A:120
BINDING SITE FOR RESIDUE SO4 A 147
2
AC2
SOFTWARE
SER A:100 , ASN A:101 , LYS A:119 , LYS A:129 , HOH A:258D , HOH A:276A
BINDING SITE FOR RESIDUE SO4 A 148
3
AC3
SOFTWARE
LYS A:26 , ARG A:33 , LYS A:135
BINDING SITE FOR RESIDUE SO4 A 149
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 1)
Info
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1: HBGF_FGF (A:80-103)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HBGF_FGF
PS00247
HBGF/FGF family signature.
FGF2_HUMAN
222-245
1
A:80-103
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Exons
(3, 3)
Info
All Exons
Exon 1.1 (A:19-51)
Exon 1.2 (A:51-85)
Exon 1.3b (A:86-145)
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/1.3b
4: Boundary 1.3b/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000264498
1
ENSE00001081612
chr4:
123747863-123748507
645
FGF2_HUMAN
1-193
193
1
A:19-51
33
1.2
ENST00000264498
2
ENSE00000970285
chr4:
123797476-123797579
104
FGF2_HUMAN
193-227
35
1
A:51-85
35
1.3b
ENST00000264498
3b
ENSE00001081614
chr4:
123813366-123819391
6026
FGF2_HUMAN
228-288
61
1
A:86-145
60
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2fgfa_ (A:)
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)
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)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
beta-Trefoil
(385)
Superfamily
:
Cytokine
(169)
Family
:
Fibroblast growth factors (FGF)
(120)
Protein domain
:
Basic FGF (FGF2)
(16)
Human (Homo sapiens) [TaxId: 9606]
(16)
1a
d2fgfa_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2fgfA00 (A:19-145)
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)
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Organisms
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)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Trefoil
(289)
Topology
:
Trefoil (Acidic Fibroblast Growth Factor, subunit A)
(289)
Homologous Superfamily
:
[code=2.80.10.50, no name defined]
(289)
Human (Homo sapiens)
(131)
1a
2fgfA00
A:19-145
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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