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2FB3
Asym. Unit
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Asym.Unit (120 KB)
Biol.Unit 1 (111 KB)
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(1)
Title
:
STRUCTURE OF MOAA IN COMPLEX WITH 5'-GTP
Authors
:
P. Haenzelmann, H. Schindelin
Date
:
08 Dec 05 (Deposition) - 09 May 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.35
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
S-Adenosylmethionine, Tim Barrel, [4Fe-4S] Clusters, 5'-Gtp, 5'- Deoxyadenosine, Ligand Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Haenzelmann, H. Schindelin
Binding Of 5'-Gtp To The C-Terminal Fes Cluster Of The Radical S-Adenosylmethionine Enzyme Moaa Provides Insights Into Its Mechanism
Proc. Natl. Acad. Sci. Usa V. 103 6829 2006
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Hetero Components
(6, 11)
Info
All Hetero Components
1a: 5'-DEOXYADENOSINE (5ADa)
2a: GUANOSINE-5'-TRIPHOSPHATE (GTPa)
3a: METHIONINE (METa)
3b: METHIONINE (METb)
4a: PYROPHOSPHATE 2- (POPa)
5a: IRON/SULFUR CLUSTER (SF4a)
5b: IRON/SULFUR CLUSTER (SF4b)
5c: IRON/SULFUR CLUSTER (SF4c)
5d: IRON/SULFUR CLUSTER (SF4d)
6a: SULFATE ION (SO4a)
6b: SULFATE ION (SO4b)
View:
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Label:
No.
Name
Count
Type
Full Name
1
5AD
1
Ligand/Ion
5'-DEOXYADENOSINE
2
GTP
1
Ligand/Ion
GUANOSINE-5'-TRIPHOSPHATE
3
MET
2
Mod. Amino Acid
METHIONINE
4
POP
1
Ligand/Ion
PYROPHOSPHATE 2-
5
SF4
4
Ligand/Ion
IRON/SULFUR CLUSTER
6
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
CYS A:28 , TYR A:30 , SER A:126 , LEU A:127 , ASP A:128 , PHE A:135 , HOH A:585
BINDING SITE FOR RESIDUE SO4 A 403
02
AC2
SOFTWARE
CYS B:28 , SER B:126 , LEU B:127 , ASP B:128
BINDING SITE FOR RESIDUE SO4 B 403
03
AC3
SOFTWARE
THR A:73 , GLY A:75 , GLU A:76 , THR A:102 , THR A:103 , SER A:126 , SF4 A:401 , 5AD A:501
BINDING SITE FOR RESIDUE MET A 500
04
AC4
SOFTWARE
GLY B:75 , GLU B:76 , THR B:102 , THR B:103 , ASN B:104 , SER B:126 , SF4 B:401
BINDING SITE FOR RESIDUE MET B 501
05
AC5
SOFTWARE
CYS A:24 , PHE A:26 , CYS A:28 , CYS A:31 , MET A:500
BINDING SITE FOR RESIDUE SF4 A 401
06
AC6
SOFTWARE
CYS A:261 , CYS A:264 , CYS A:278 , TYR A:316 , SER A:317 , GTP A:404
BINDING SITE FOR RESIDUE SF4 A 402
07
AC7
SOFTWARE
ARG A:17 , LYS A:69 , ARG A:71 , THR A:102 , ASN A:124 , LYS A:163 , ASN A:165 , ARG A:192 , PHE A:260 , ARG A:266 , ARG A:268 , SF4 A:402 , 5AD A:501
BINDING SITE FOR RESIDUE GTP A 404
08
AC8
SOFTWARE
TYR A:30 , SER A:126 , VAL A:167 , MET A:197 , GTP A:404 , MET A:500 , HOH A:532 , HOH A:585
BINDING SITE FOR RESIDUE 5AD A 501
09
AC9
SOFTWARE
CYS B:24 , PHE B:26 , CYS B:28 , CYS B:31 , MET B:32 , GLY B:75 , ASN B:104 , MET B:501
BINDING SITE FOR RESIDUE SF4 B 401
10
BC1
SOFTWARE
CYS B:261 , CYS B:264 , CYS B:278 , ASP B:314 , TYR B:316 , SER B:317
BINDING SITE FOR RESIDUE SF4 B 402
11
BC2
SOFTWARE
ARG B:71 , ASN B:124 , ARG B:192 , HOH B:531
BINDING SITE FOR RESIDUE POP B 404
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: MOAA_NIFB_PQQE (A:20-31,B:20-31)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
MOAA_NIFB_PQQE
PS01305
moaA / nifB / pqqE family signature.
MOAA_STAA8
20-31
2
A:20-31
B:20-31
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Exons
(0, 0)
Info
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2fb3a_ (A:)
1b: SCOP_d2fb3b_ (B:)
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(
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Organisms
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)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Radical SAM enzymes
(6)
Family
:
MoCo biosynthesis proteins
(4)
Protein domain
:
Molybdenum cofactor biosynthesis protein A MoaA
(4)
Staphylococcus aureus [TaxId: 1280]
(4)
1a
d2fb3a_
A:
1b
d2fb3b_
B:
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CATH Domains
(0, 0)
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Pfam Domains
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Asymmetric Unit 1
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