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2FAU
Asym. Unit
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Asym.Unit (56 KB)
Biol.Unit 1 (52 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN VPS26
Authors
:
H. Shi, R. Rojas, J. S. Bonifacino, J. H. Hurley
Date
:
08 Dec 05 (Deposition) - 30 May 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Arrestin, Retromer, Protein Transport
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Shi, R. Rojas, J. S. Bonifacino, J. H. Hurley
The Retromer Subunit Vps26 Has An Arrestin Fold And Binds Vps35 Through Its C-Terminal Domain.
Nat. Struct. Mol. Biol. V. 13 540 2006
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: S-DIMETHYLARSINOYL-CYSTEINE (CAFa)
1b: S-DIMETHYLARSINOYL-CYSTEINE (CAFb)
2a: GLYCEROL (GOLa)
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No.
Name
Count
Type
Full Name
1
CAF
2
Mod. Amino Acid
S-DIMETHYLARSINOYL-CYSTEINE
2
GOL
1
Ligand/Ion
GLYCEROL
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:39 , TYR A:40 , TYR A:147 , ASP A:148
BINDING SITE FOR RESIDUE GOL A 340
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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;
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End label:
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Exons
(8, 8)
Info
All Exons
Exon 1.3 (A:6-51)
Exon 1.4 (A:52-77)
Exon 1.5 (A:77-129)
Exon 1.6b (A:129-184)
Exon 1.7 (A:184-220)
Exon 1.8 (A:220-238)
Exon 1.9c (A:245-290)
Exon 1.11e (A:291-299)
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All Exon Boundaries
1: Boundary 1.2a/1.3
2: Boundary 1.3/1.4
3: Boundary 1.4/1.5
4: Boundary 1.5/1.6b
5: Boundary 1.6b/1.7
6: Boundary 1.7/1.8
7: Boundary 1.8/1.9c
8: Boundary 1.9c/1.11e
9: Boundary 1.11e/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000373382
1
ENSE00001460473
chr10:
70883268-70883302
35
VP26A_HUMAN
-
0
0
-
-
1.2a
ENST00000373382
2a
ENSE00001460472
chr10:
70883416-70884036
621
VP26A_HUMAN
1-1
1
0
-
-
1.3
ENST00000373382
3
ENSE00001095997
chr10:
70892654-70892803
150
VP26A_HUMAN
2-51
50
1
A:6-51
46
1.4
ENST00000373382
4
ENSE00000933686
chr10:
70915568-70915643
76
VP26A_HUMAN
52-77
26
1
A:52-77
26
1.5
ENST00000373382
5
ENSE00000933687
chr10:
70916763-70916919
157
VP26A_HUMAN
77-129
53
1
A:77-129
53
1.6b
ENST00000373382
6b
ENSE00001278296
chr10:
70917803-70917967
165
VP26A_HUMAN
129-184
56
1
A:129-184
56
1.7
ENST00000373382
7
ENSE00000933689
chr10:
70922162-70922268
107
VP26A_HUMAN
184-220
37
1
A:184-220
37
1.8
ENST00000373382
8
ENSE00001278281
chr10:
70925798-70925866
69
VP26A_HUMAN
220-243
24
1
A:220-238
19
1.9c
ENST00000373382
9c
ENSE00000933691
chr10:
70928245-70928387
143
VP26A_HUMAN
243-290
48
1
A:245-290
46
1.11e
ENST00000373382
11e
ENSE00001460424
chr10:
70930912-70932617
1706
VP26A_HUMAN
291-327
37
1
A:291-299
9
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SCOP Domains
(0, 0)
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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